RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 TMPRSS11AQ6ZMR5 421 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 C17orf107Q6ZR85 190 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 KCTD20Q7Z5Y7 419 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 ENTHD1Q8IYW4 607 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 TCEANCQ8N8B7 351 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 OR13C2Q8NGS9 318 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 ITLN1Q8WWA0 313 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 DUX5Q96PT3 197 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 COPS4Q9BT78 406 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 FAM192AQ9GZU8 254 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 EGLN3Q9H6Z9 239 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 BEX1Q9HBH7 125 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 MRPS18AQ9NVS2 196 aaKnown RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 ATPIF1Q9UII2 106 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 KCNG2Q9UJ96 466 aa7.91□□□□□ -1.14
BRCA1-226ENST00000591534 EXOSC1Q9Y3B2 195 aaKnown RBP7.91□□□□□ -1.14
BRCA1-226ENST00000591534 DYSFO75923 2080 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 SMIM31A0A1B0GVY4 71 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OR6C6A6NF89 314 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 CEACAM18A8MTB9 384 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 H7C1C5 153 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 GNAO1P09471 354 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 WNT2P09544 360 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 GDNFP39905 211 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 LSM6P62312 80 aaKnown RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 LCN6P62502 163 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 ACTA2P62736 377 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 ACTG2P63267 376 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 DEFA6Q01524 100 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 ENDOGQ14249 297 aaKnown RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 KCNJ8Q15842 424 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 ZNF181Q2M3W8 571 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 TIMM50Q3ZCQ8 353 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 KLF17Q5JT82 389 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 GPR157Q5UAW9 335 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OTPQ5XKR4 325 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 LEG1Q6P5S2 330 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 GLB1L2Q8IW92 636 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 BPIFB6Q8NFQ5 453 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OR8G5Q8NG78 346 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OR8B3Q8NGG8 313 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OR4F5Q8NH21 305 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 RAB40AQ8WXH6 277 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 THRSPQ92748 146 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 APOBEC3DQ96AK3 386 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 TMIGD2Q96BF3 282 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 UPRTQ96BW1 309 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 NEIL1Q96FI4 390 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 TMEM80Q96HE8 168 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 OR8B2Q96RD0 313 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 BCL7BQ9BQE9 202 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 SLC30A2Q9BRI3 323 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 MND1Q9BWT6 205 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 HCAR1Q9BXC0 346 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 DUSP21Q9H596 190 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 GCM1Q9NP62 436 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 NOX4Q9NPH5 578 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 POLR1DQ9Y2S0 133 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 STARD10Q9Y365 291 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 NOP16Q9Y3C1 178 aaKnown RBP7.9□□□□□ -1.14
BRCA1-226ENST00000591534 MMP24Q9Y5R2 645 aa7.9□□□□□ -1.14
BRCA1-226ENST00000591534 IGHV2-70DA0A0C4DH43 119 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 TEX13CA0A0J9YWL9 993 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 PRSS37A4D1T9 235 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 MYL12BO14950 172 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 KHDRBS3O75525 346 aaKnown RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 KNG1P01042 644 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 FMO3P31513 532 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 CD80P33681 288 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 NPY4RP50391 375 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 FXYD6P3P58550 94 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 TAS2R43P59537 309 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 RPS7P62081 194 aaKnown RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 EFNB1P98172 346 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 KRR1Q13601 381 aaKnown RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 TMEM255AQ5JRV8 349 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 CD276Q5ZPR3 534 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 FBXW12Q6X9E4 464 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 MEPCEQ7L2J0 689 aaKnown RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 SHFQ7M4L6 423 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 KLBQ86Z14 1044 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 BCL6BQ8N143 479 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 GJC3Q8NFK1 279 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 OR11L1Q8NGX0 322 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 OR1F12Q8NHA8 337 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 ASB17Q8WXJ9 295 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 RORBQ92753 470 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 ERGIC1Q969X5 290 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 FAM71F1Q96KD3 344 aaPredicted RBP7.89□□□□□ -1.15
BRCA1-226ENST00000591534 SIGLEC11Q96RL6 698 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 CDCA4Q9BXL8 241 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 EMC7Q9NPA0 242 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 TRIM36Q9NQ86 728 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 TMEM100Q9NV29 134 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 CLN8Q9UBY8 286 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 PSORS1C1Q9UIG5 152 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 ADAM18Q9Y3Q7 739 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 IER3IP1Q9Y5U9 82 aa7.89□□□□□ -1.15
BRCA1-226ENST00000591534 PKD1L1Q8TDX9 2849 aa7.88□□□□□ -1.15
BRCA1-226ENST00000591534 KIR2DS1A0A191URI9 304 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms