RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 C12orf43Q96C57 262 aaKnown RBP12.95□□□□□ -0.34
DDX39A-216ENST00000591275 NKX3-1Q99801 234 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-216ENST00000591275 FAM234AQ9H0X4 552 aa12.95□□□□□ -0.34
DDX39A-216ENST00000591275 ELL3Q9HB65 397 aaPredicted RBP12.95□□□□□ -0.34
DDX39A-216ENST00000591275 CENPMQ9NSP4 180 aa12.95□□□□□ -0.34
DDX39A-216ENST00000591275 HAO2Q9NYQ3 351 aa12.95□□□□□ -0.34
DDX39A-216ENST00000591275 KCNG2Q9UJ96 466 aa12.95□□□□□ -0.34
DDX39A-216ENST00000591275 NKX6-3A6NJ46 265 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 M0R1W7 72 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 XRCC2O43543 280 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 ANGPTL7O43827 346 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 CHST1O43916 411 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 FBXO24O75426 580 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 MPIG6BO95866 241 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 NDUFB7P17568 137 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 RHCEP18577 417 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 POU1F1P28069 291 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 GSK3BP49841 420 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 SLC7A2P52569 658 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 HABP2Q14520 560 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 DGUOKQ16854 277 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 FOXB2Q5VYV0 432 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 HCP5Q6MZN7 132 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 C11orf87Q6NUJ2 197 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 C16orf89Q6UX73 402 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 ARPINQ7Z6K5 226 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 ZDHHC21Q8IVQ6 265 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 CYB561A3Q8NBI2 242 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 PROKR2Q8NFJ6 384 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 DUS3LQ96G46 650 aaKnown RBP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 AJUBAQ96IF1 538 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 GAFA1Q96PS6 74 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 FUZQ9BT04 418 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 NPFFR1Q9GZQ6 430 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 OPA3Q9H6K4 179 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 RANBP3Q9H6Z4 567 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 DCLRE1BQ9H816 532 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 SLC25A10Q9UBX3 287 aaPredicted RBP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 AP3M1Q9Y2T2 418 aa12.94□□□□□ -0.34
DDX39A-216ENST00000591275 SF3B6Q9Y3B4 125 aaKnown RBP12.94□□□□□ -0.34
DDX39A-216ENST00000591275 MEGF11A6BM72 1044 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 SPARCP09486 303 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 DDOSTP39656 456 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 BMXP51813 675 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 FAM3AP98173 230 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 EMX1Q04741 257 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-216ENST00000591275 BLMHQ13867 455 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 SPATS1Q496A3 300 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 ATPAF1Q5TC12 328 aaPredicted RBP12.93□□□□□ -0.34
DDX39A-216ENST00000591275 FAM86B1Q8N7N1 296 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 OR4C15Q8NGM1 316 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 SPSB4Q96A44 273 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 SLAMF6Q96DU3 332 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 C7orf34Q96L11 122 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 KCNJ15Q99712 375 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
DDX39A-216ENST00000591275 H0YAE9 185 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 AKR7A2O43488 359 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 TIPRLO75663 272 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 MXRA7P84157 204 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 TIGD6Q17RP2 521 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 GFOD2Q3B7J2 385 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 ZNF788Q6ZQV5 615 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 OR4F17Q8NGA8 305 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 RPL3LQ92901 407 aaKnown RBP12.92□□□□□ -0.34
DDX39A-216ENST00000591275 SGK3Q96BR1 496 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 MED30Q96HR3 178 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 REEP6Q96HR9 211 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 DHRS1Q96LJ7 313 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 OR4F4Q96R69 305 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 CITED2Q99967 270 aaPredicted RBP12.92□□□□□ -0.34
DDX39A-216ENST00000591275 PAPOLGQ9BWT3 736 aaKnown RBP12.92□□□□□ -0.34
DDX39A-216ENST00000591275 MEGF9Q9H1U4 602 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 RHBDD3Q9Y3P4 386 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 COMMD3-BMI1R4GMX3 469 aa12.92□□□□□ -0.34
DDX39A-216ENST00000591275 IDH3BO43837 385 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 CIB2O75838 187 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 ANXA2P07355 339 aaKnown RBP12.91□□□□□ -0.34
DDX39A-216ENST00000591275 GNALP38405 381 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 CX3CR1P49238 355 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 NDUFA11Q86Y39 141 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 FAM185AQ8N0U4 392 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 PGAM4Q8N0Y7 254 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 ANGPTL6Q8NI99 470 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 KCTD14Q9BQ13 255 aaPredicted RBP12.91□□□□□ -0.34
DDX39A-216ENST00000591275 DNTTIP1Q9H147 329 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 TLNRD1Q9H1K6 362 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 ZNF702PQ9H963 129 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 V9GYQ6 96 aa12.91□□□□□ -0.34
DDX39A-216ENST00000591275 hCG_38984A0A1B0GV85 526 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 ADARB2-AS1A8MUL3 147 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 K7EIL1 84 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 SIGLEC5O15389 551 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 GADD45GO95257 159 aa12.9□□□□□ -0.34
DDX39A-216ENST00000591275 ACAA1P09110 424 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms