RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 CXCR4P61073 352 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 MFGE8Q08431 387 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF322Q6U7Q0 402 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 SSX6Q7RTT6 188 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 C11orf53Q8IXP5 236 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 C10orf67Q8IYJ2 551 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 CBR4Q8N4T8 237 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 OR51G2Q8NGK0 314 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 OR11L1Q8NGX0 322 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 EME1Q96AY2 570 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 DACT3Q96B18 629 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 RAB3IPQ96QF0 476 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 TTTY10Q9BZA0 68 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 FGF23Q9GZV9 251 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 FN3KRPQ9HA64 309 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 H2AFY2Q9P0M6 372 aaPredicted RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 RNF7Q9UBF6 113 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 WARS2Q9UGM6 360 aaKnown RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 NUFIP1Q9UHK0 495 aaKnown RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 OPN4Q9UHM6 478 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 MRM2Q9UI43 246 aaKnown RBP9.36□□□□□ -0.91
SMAD4-211ENST00000590499 PCDHB10Q9UN67 800 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 LRCH1Q9Y2L9 728 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 PPIAL4AQ9Y536 164 aa9.36□□□□□ -0.91
SMAD4-211ENST00000590499 LOC105371242A0A075B767 164 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 TRAPPC2LH3BP13 241 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PHYHO14832 338 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 TNFRSF13BO14836 293 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 MAGEB4O15481 346 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PHF1O43189 567 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 CST4P01036 141 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 FSHBP01225 129 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 LHBP01229 141 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 IRF2P14316 349 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 RPS2P15880 293 aaKnown RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF12P17014 697 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 SRP14P37108 136 aaKnown RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PSMB10P40306 273 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 RIDAP52758 137 aaKnown RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PAX2Q02962 417 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 EGR3Q06889 387 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 MZT1Q08AG7 82 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF154Q13106 437 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 TMED1Q13445 227 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 SNCBQ16143 134 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF829Q3KNS6 432 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ESCO2Q56NI9 601 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 SLC25A30Q5SVS4 291 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF684Q5T5D7 378 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 DCAF12L2Q5VW00 463 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 FAHD2BQ6P2I3 314 aaPredicted RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 DCDC5Q6ZRR9 648 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF826PQ6ZT77 177 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PQLC1Q8N2U9 271 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 GALNT4Q8N4A0 578 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 GCSAMQ8N6F7 178 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 C19orf18Q8NEA5 215 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 DEFB108BQ8NET1 73 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 OR1M1Q8NGA1 313 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 TRUB1Q8WWH5 349 aaKnown RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 HPSE2Q8WWQ2 592 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 UBE2FQ969M7 185 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ITFG2Q969R8 447 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 FAHD2AQ96GK7 314 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 MBOAT4Q96T53 435 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 APOL4Q9BPW4 351 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PAPOLGQ9BWT3 736 aaKnown RBP9.35□□□□□ -0.91
SMAD4-211ENST00000590499 PBOV1Q9GZY1 135 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 TLNRD1Q9H1K6 362 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 MMP26Q9NRE1 261 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 C14orf119Q9NWQ9 140 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 IKZF2Q9UKS7 526 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 MPC1Q9Y5U8 109 aa9.35□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF670-ZNF695F2Z2N8 137 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-211ENST00000590499 LGALS8O00214 317 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 APOL3O95236 402 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 TTRP02766 147 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 GRPP07492 148 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 EGR1P18146 543 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 CFHR2P36980 270 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 CDC42P60953 191 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 SNRPGP62308 76 aaKnown RBP9.34□□□□□ -0.91
SMAD4-211ENST00000590499 CSNK2BP67870 215 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 PRDX4Q13162 271 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 FAM76BQ5HYJ3 339 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 ZBTB37Q5TC79 503 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 LYPD2Q6UXB3 125 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 ZNF841Q6ZN19 808 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 Q6ZSR3 168 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 C1QL2Q7Z5L3 287 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 FTMTQ8N4E7 242 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 OR8S1Q8NH09 359 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 FAM81AQ8TBF8 368 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 OR5P3Q8WZ94 311 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 PPP1R14AQ96A00 147 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 NEIL1Q96FI4 390 aaPredicted RBP9.34□□□□□ -0.91
SMAD4-211ENST00000590499 SLC29A1Q99808 456 aa9.34□□□□□ -0.91
SMAD4-211ENST00000590499 SSBP3Q9BWW4 388 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms