RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 C19orf18Q8NEA5 215 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 OR4Q3Q8NH05 313 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 OR51F2Q8NH61 342 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 TEX47Q8TBZ9 253 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 DEDD2Q8WXF8 326 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 ACOT11Q8WXI4 607 aaPredicted RBP6.56□□□□□ -1.36
SMAD4-209ENST00000589941 OSTF1Q92882 214 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 RAB8BQ92930 207 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 MUCL1Q96DR8 90 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 C7orf50Q9BRJ6 194 aaKnown RBP6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SLC38A1Q9H2H9 487 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 GLIPR2Q9H4G4 154 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 SLC35C2Q9NQQ7 365 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 INPP5EQ9NRR6 644 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 CALML5Q9NZT1 146 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 EMC3Q9P0I2 261 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 EIF3KQ9UBQ5 218 aaKnown RBP6.56□□□□□ -1.36
SMAD4-209ENST00000589941 OPN4Q9UHM6 478 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 VDAC3Q9Y277 283 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 CARD8Q9Y2G2 431 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 NPTNQ9Y639 398 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 STARD9Q9P2P6 4700 aa6.56□□□□□ -1.36
SMAD4-209ENST00000589941 IGHV3-15A0A0B4J1V0 119 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 FAM240BA0A1B0GVZ2 78 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 INMT-MINDY4F8WBC2 141 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 CHP2O43745 196 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 PLOD3O60568 738 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 CRYZL1O95825 349 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 HMGN1P05114 100 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 IFI6P09912 130 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 NPR2P20594 1047 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 GALNSP34059 522 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 EVI2BP34910 448 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 OR3A2P47893 321 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 HOXA4Q00056 320 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 MXD1Q05195 221 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 TGM3Q08188 693 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 ST3GAL3Q11203 375 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 GPR176Q14439 515 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 ZNHIT3Q15649 155 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 LTB4RQ15722 352 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 SMARCD3Q6STE5 483 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 C17orf107Q6ZR85 190 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 PXKQ7Z7A4 578 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 OAFQ86UD1 273 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 TPRA1Q86W33 373 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 GID4Q8IVV7 300 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 CADM2Q8N3J6 435 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 ZNF433Q8N7K0 673 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 OR4N2Q8NGD1 307 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 OR2V1Q8NHB1 315 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 PIGXQ8TBF5 258 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 SNAPC3Q92966 411 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 HIST1H2AAQ96QV6 131 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 OR2M2Q96R28 347 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 HEXA-AS1Q9H8Q6 139 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 HEYLQ9NQ87 328 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 GLRX2Q9NS18 164 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 MAT2BQ9NZL9 334 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 RABL2AQ9UBK7 228 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 DNAJB11Q9UBS4 358 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 CES1P1Q9UKY3 287 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 RABL2BQ9UNT1 228 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 MMP24Q9Y5R2 645 aa6.55□□□□□ -1.36
SMAD4-209ENST00000589941 SOX21Q9Y651 276 aaPredicted RBP6.55□□□□□ -1.36
SMAD4-209ENST00000589941 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 LOC105371267A0A1B0GV96 52 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 LEUTXA8MZ59 168 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 TO15178 435 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 CTDSPLO15194 276 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 RNF13O43567 381 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 GSTZ1O43708 216 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 LYPD3O95274 346 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 IGHV3-9P01782 118 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SAGP10523 405 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NR2F1P10589 423 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 PSKH1P11801 424 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 ELK1P19419 428 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NT5EP21589 574 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 TNFSF4P23510 183 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NTSP30990 170 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 PPOXP50336 477 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 EMDP50402 254 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 IDH3GP51553 393 aaPredicted RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SUMO2P61956 95 aaKnown RBP6.54□□□□□ -1.36
SMAD4-209ENST00000589941 LMO4P61968 165 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 HSPB3Q12988 150 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 BAMBIQ13145 260 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 PMS2P11Q13670 270 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SLC9A3R2Q15599 337 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 ADIPOQQ15848 244 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 RUSC1-AS1Q66K80 236 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 SUMO4Q6EEV6 95 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 OR4C11Q6IEV9 310 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 PYHIN1Q6K0P9 492 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 FAM180BQ6P0A1 224 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 BAIAP2L2Q6UXY1 529 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 IDO2Q6ZQW0 420 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 MBOAT2Q6ZWT7 520 aa6.54□□□□□ -1.36
SMAD4-209ENST00000589941 NR2C2APQ86WQ0 139 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms