RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 PRKACAP17612 351 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 MST1P26927 711 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 GPM6AP51674 278 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 TAS2R46P59540 309 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CLINT1Q14677 625 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 SSPNQ14714 243 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CREB3L2Q70SY1 520 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 TUSC5Q8IXB3 177 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CMTM1Q8IZ96 169 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 OR52H1Q8NGJ2 320 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 STOML3Q8TAV4 291 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 PPP1R1CQ8WVI7 109 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 MBD2Q9UBB5 411 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 IL17BQ9UHF5 180 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 ZNF728P0DKX0 622 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 MOGAT2Q3SYC2 334 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CLCC1Q96S66 551 aa12.9□□□□□ -0.34
RETREG3-208ENST00000589797 CREBBPQ92793 2442 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 NME2P22392 152 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 FKBP2P26885 142 aaKnown RBP12.9□□□□□ -0.35
RETREG3-208ENST00000589797 TAS2R31P59538 309 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 TRA2AQ13595 282 aaKnown RBP eCLIP12.9□□□□□ -0.35
RETREG3-208ENST00000589797 TMUB2Q71RG4 321 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 FAM122BQ7Z309 247 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 HSD17B11Q8NBQ5 300 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 GSX2Q9BZM3 304 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 C12orf10Q9HB07 376 aa12.9□□□□□ -0.35
RETREG3-208ENST00000589797 K7ESF4 209 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-208ENST00000589797 OR5H8P0DN80 308 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 PTGS2P35354 604 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 PTGFRP43088 359 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 OR2B11Q5JQS5 317 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 OR2T2Q6IF00 324 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 ZSCAN1Q8NBB4 408 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 DEFB108BQ8NET1 73 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 OR6X1Q8NH79 312 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 RAB33BQ9H082 229 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 KCNIP1Q9NZI2 227 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 MLXQ9UH92 298 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 PCDHGA9Q9Y5G4 932 aaKnown RBP12.89□□□□□ -0.35
RETREG3-208ENST00000589797 LGALS8O00214 317 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 HSD17B6O14756 317 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 LYZL6O75951 148 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 NDUFB6O95139 128 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 WNT11O96014 354 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 TTRP02766 147 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 S100A6P06703 90 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 M6PRP20645 277 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 GLRA1P23415 457 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 OR56B2PQ8NGI1 322 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 KLF13Q9Y2Y9 288 aaPredicted RBP12.89□□□□□ -0.35
RETREG3-208ENST00000589797 A0A087WZY1 265 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 IGKV3D-11A0A0A0MRZ8 115 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 RAB27BO00194 218 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 KCNAB3O43448 404 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 ITGB2P05107 769 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 ADH6P28332 368 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 CATSPERDQ86XM0 798 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 TMEM104Q8NE00 496 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 SLAMF9Q96A28 289 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 SLC25A38Q96DW6 304 aa12.89□□□□□ -0.35
RETREG3-208ENST00000589797 DOPEY2Q9Y3R5 2298 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 A0A1B0GUH1 482 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 F8W036 122 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 IL2RGP31785 369 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 FCGR2CP31995 323 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 RAC3P60763 192 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 BLOC1S1P78537 153 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 ISXQ2M1V0 245 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 SPAG16Q8N0X2 631 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 BORCS7-ASMTA0A0B4J1R7 106 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 IGLV1-36A0A0B4J1U3 117 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 PLSCR5A0PG75 271 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 SMCO3A2RU48 225 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 LIFP15018 202 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 MEOX1P50221 254 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 DHRS2Q13268 280 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 GLDNQ6ZMI3 551 aaPredicted RBP12.88□□□□□ -0.35
RETREG3-208ENST00000589797 FAM109AQ8N4B1 249 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 OR1S1Q8NH92 325 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 TMED6Q8WW62 240 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 DYRK2Q92630 601 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
RETREG3-208ENST00000589797 CSAG2Q9Y5P2 127 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 SIRPB1O00241 398 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 LYPD3O95274 346 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 CAMLGP49069 296 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 PMP22Q01453 160 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 PPP1R1AQ13522 171 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
RETREG3-208ENST00000589797 RGP1Q92546 391 aaPredicted RBP12.88□□□□□ -0.35
RETREG3-208ENST00000589797 TRIOO75962 3097 aa12.88□□□□□ -0.35
RETREG3-208ENST00000589797 LNP1A1A4G5 178 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 ZNF732B4DXR9 585 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 XRCC2O43543 280 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 WISP1O95388 367 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 PPP3CBP16298 524 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 GLYATL2Q8WU03 294 aa12.87□□□□□ -0.35
RETREG3-208ENST00000589797 RNF133Q8WVZ7 376 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms