RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 SLC16A14Q7RTX9 510 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 OR2I1PQ8NGU4 316 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 S100A13Q99584 98 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 C19orf25Q9UFG5 118 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 EDARQ9UNE0 448 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 IGHV3-20A0A0C4DH32 117 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 C2orf72A6NCS6 295 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 AQP7P3A6NL99 342 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 FOXI3A8MTJ6 420 aaPredicted RBP16.38■□□□□ 0.21
DDX39A-206ENST00000587730 CST4P01036 141 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 IFNA2P01563 188 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 IGLV3-1P01715 115 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 SRFP11831 508 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 ZNF17P17021 662 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 HMGN3Q15651 99 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 KISS1Q15726 138 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 NKAIN1Q4KMZ8 207 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 AADACL3Q5VUY0 350 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 Q6ZSR3 168 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 POC1BQ8TC44 478 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 NUDT22Q9BRQ3 303 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 BANF2Q9H503 90 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 BIN3Q9NQY0 253 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 EHFQ9NZC4 300 aa16.38■□□□□ 0.21
DDX39A-206ENST00000587730 A0A087WZY1 265 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 EFNA2O43921 213 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 ZNF354AO60765 605 aaPredicted RBP16.37■□□□□ 0.21
DDX39A-206ENST00000587730 MTRF1O75570 445 aaKnown RBP16.37■□□□□ 0.21
DDX39A-206ENST00000587730 JTBO76095 146 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 ONECUT2O95948 504 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 ADCYAP1P18509 176 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 PAX6P26367 422 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 RFC3P40938 356 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 GUCA2BQ16661 112 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 ANKRD55Q3KP44 614 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 FAM57BQ71RH2 274 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 GJC3Q8NFK1 279 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 HLA-CQ95604 372 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 PGAM5Q96HS1 289 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 LMAN1LQ9HAT1 526 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 PARP11Q9NR21 331 aa16.37■□□□□ 0.21
DDX39A-206ENST00000587730 ADAP1O75689 374 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 RAD51DO75771 328 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 IFNA21P01568 189 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 QDPRP09417 244 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 RPS2P15880 293 aaKnown RBP16.36■□□□□ 0.21
DDX39A-206ENST00000587730 SMAD4Q13485 552 aaKnown RBP16.36■□□□□ 0.21
DDX39A-206ENST00000587730 COMMD1Q8N668 190 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 DEFB119Q8N690 84 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 OR2M3Q8NG83 312 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 RELTQ969Z4 430 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 OR5B2Q96R09 309 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 MICU1Q9BPX6 476 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 RHOFQ9HBH0 211 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 TAF9BQ9HBM6 251 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 MYOTQ9UBF9 498 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 V9GYS6 101 aa16.36■□□□□ 0.21
DDX39A-206ENST00000587730 DHRS3O75911 302 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 MSR1P21757 451 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 DHPSP49366 369 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 SULT1A2P50226 295 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 RAB13P51153 203 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 ARHGDIBP52566 201 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 OPN5Q6U736 354 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 C16orf47Q6ZP98 133 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 SHISA6Q6ZSJ9 500 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 CPEB2Q7Z5Q1 589 aaKnown RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 SGPP2Q8IWX5 399 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 OR4A4PQ8NGN8 299 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 THAP3Q8WTV1 239 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 SPACA5Q96QH8 159 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 NRIP2Q9BQI9 281 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 ST6GALNAC5Q9BVH7 336 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 PECRQ9BY49 303 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 SAV1Q9H4B6 383 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 PLEKHA2Q9HB19 425 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 RCC2Q9P258 522 aaKnown RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 PCDHGA1Q9Y5H4 931 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 PQLC2LA1A4F0 135 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 DHRS7CA6NNS2 312 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 RER1O15258 196 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 CTSDP07339 412 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 BLVRBP30043 206 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 PTGDSP41222 190 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 F2RL1P55085 397 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 RAB32Q13637 225 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 MST1LQ2TV78 715 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 C10orf128Q5T292 105 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 FOXL2NBQ6ZUU3 175 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 BOLLQ8N9W6 283 aaKnown RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 KDF1Q8NAX2 398 aaPredicted RBP16.35■□□□□ 0.21
DDX39A-206ENST00000587730 CNTNAP3Q9BZ76 1288 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 CHST5Q9GZS9 411 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 TLNRD1Q9H1K6 362 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 ZNF160Q9HCG1 818 aa16.35■□□□□ 0.21
DDX39A-206ENST00000587730 ALPK2Q86TB3 2170 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 IGKV1-9A0A0C4DH69 117 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 MSGN1A6NI15 193 aa16.34■□□□□ 0.21
DDX39A-206ENST00000587730 TP53I11O14683 189 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms