RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 USE1Q9NZ43 259 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 KIF17Q9P2E2 1029 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 OAZ3Q9UMX2 235 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 SIGLEC9Q9Y336 463 aa9.55□□□□□ -0.88
LIG3-207ENST00000586119 RNASEK-C17orf49H0YIS7 233 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 NDUFA2O43678 99 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 GYPBP06028 91 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 CLUP10909 449 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 OSMP13725 252 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 PRKACGP22612 351 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 PAX6P26367 422 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 DAPP51397 102 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 RIPK1Q13546 671 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 KCNJ8Q15842 424 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 PCK2Q16822 640 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 KDM4DQ6B0I6 523 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 HS3ST5Q8IZT8 346 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 Q8N7P7 452 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 PLPP7Q8NBV4 271 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 SLC37A3Q8NCC5 494 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 OR8D4Q8NGM9 314 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 C17orf50Q8WW18 174 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 SGK3Q96BR1 496 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 SLC22A4Q9H015 551 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 PAPOLBQ9NRJ5 636 aaKnown RBP9.54□□□□□ -0.88
LIG3-207ENST00000586119 MRPL15Q9P015 296 aaKnown RBP9.54□□□□□ -0.88
LIG3-207ENST00000586119 ZNF319Q9P2F9 582 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 ONECUT1Q9UBC0 465 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
LIG3-207ENST00000586119 SAC3D1A6NKF1 404 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 G3V4G9 280 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 ZNF593O00488 134 aaPredicted RBP9.53□□□□□ -0.88
LIG3-207ENST00000586119 BHLHE40O14503 412 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 TBX1O43435 398 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 SPARCP09486 303 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 ESRRGP62508 458 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 FAM3AP98173 230 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 EGR3Q06889 387 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 IKZF1Q13422 519 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 KLHL12Q53G59 568 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 SLC35E4Q6ICL7 350 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 DRAM2Q6UX65 266 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 WDR82Q6UXN9 313 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 SLC16A9Q7RTY1 509 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 DPY19L4Q7Z388 723 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 PROKR2Q8NFJ6 384 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 OR1M1Q8NGA1 313 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 TEX47Q8TBZ9 253 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 EME1Q96AY2 570 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 SLAMF6Q96DU3 332 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 KCNJ15Q99712 375 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 COPS4Q9BT78 406 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 WDR13Q9H1Z4 485 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 C16orf95Q9H693 158 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 RNPEPL1Q9HAU8 725 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 KRT84Q9NSB2 600 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 SNTG1Q9NSN8 517 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 TBC1D23Q9NUY8 699 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 ZNRD1Q9P1U0 126 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 FAM96BQ9Y3D0 163 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
LIG3-207ENST00000586119 H3BN98 237 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 CDIPTO14735 213 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 CASQ2O14958 399 aaPredicted RBP9.52□□□□□ -0.89
LIG3-207ENST00000586119 ECDO95905 644 aaPredicted RBP9.52□□□□□ -0.89
LIG3-207ENST00000586119 ALPLP05186 524 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 TGM4P49221 684 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 ALDH3A2P51648 485 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 RPL15P61313 204 aaKnown RBP9.52□□□□□ -0.89
LIG3-207ENST00000586119 SLC34A1Q06495 639 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 TAF13Q15543 124 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 DHRS7BQ6IAN0 325 aaPredicted RBP9.52□□□□□ -0.89
LIG3-207ENST00000586119 ZBTB49Q6ZSB9 765 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 PACRGLQ8N7B6 248 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 C11orf44Q8N8P7 122 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 OR2T33Q8NG76 320 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 OR4Q3Q8NH05 313 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 OR8S1Q8NH09 359 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 PPP1R35Q8TAP8 253 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 TNFRSF14Q92956 283 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 SPSB4Q96A44 273 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 CIB1Q99828 191 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 TSSK6Q9BXA6 273 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 TEX12Q9BXU0 123 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 FGF23Q9GZV9 251 aaPredicted RBP9.52□□□□□ -0.89
LIG3-207ENST00000586119 DPAGT1Q9H3H5 408 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 RHBDD3Q9Y3P4 386 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 ORC6Q9Y5N6 252 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 KPTNQ9Y664 436 aa9.52□□□□□ -0.89
LIG3-207ENST00000586119 A0A1B0GVI7 797 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 ANKRD30BLA7E2S9 258 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 NPFFO15130 113 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 TSPAN9O75954 239 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 HMGN1P05114 100 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 CX3CR1P49238 355 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 ENTPD1P49961 510 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 CRISP1P54107 249 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 CRMP1Q14194 572 aa9.51□□□□□ -0.89
LIG3-207ENST00000586119 MICBQ29980 383 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms