RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 LHBP01229 141 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 GNAO1P09471 354 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 EMX1Q04741 257 aaPredicted RBP14.74□□□□□ -0.05
TOP3A-220ENST00000585031 DGCR6Q14129 220 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 KCNJ8Q15842 424 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 KCTD21Q4G0X4 260 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 FAM122BQ7Z309 247 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 WFDC9Q8NEX5 89 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 R3HDM4Q96D70 268 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 FEVQ99581 238 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 APOL4Q9BPW4 351 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 MRPS26Q9BYN8 205 aaKnown RBP14.74□□□□□ -0.05
TOP3A-220ENST00000585031 ANKRD19PQ9H560 264 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 RERGLQ9H628 205 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 FN3KRPQ9HA64 309 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 C1orf123Q9NWV4 160 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 KAAG1Q9UBP8 84 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 ATPIF1Q9UII2 106 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 HSPE1-MOB4S4R3N1 261 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 DNAH1Q9P2D7 4330 aa14.74□□□□□ -0.05
TOP3A-220ENST00000585031 MEIOCA2RUB1 952 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 FFAR1O14842 300 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 NDUFA2O43678 99 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 CHST1O43916 411 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 IFNGR2P38484 337 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 KRTAP10-11P60412 298 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 HABP2Q14520 560 aaPredicted RBP14.73□□□□□ -0.05
TOP3A-220ENST00000585031 TRAM2Q15035 370 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 NRMQ8IXM6 262 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 SPERTQ8NA61 448 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 SEH1LQ96EE3 360 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 CCL13Q99616 98 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 COQ7Q99807 217 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 HCAR1Q9BXC0 346 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 GABARAPL3Q9BY60 117 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 RHCGQ9UBD6 479 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 A4GNTQ9UNA3 340 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 CAB39Q9Y376 341 aaPredicted RBP14.73□□□□□ -0.05
TOP3A-220ENST00000585031 MAB21L2Q9Y586 359 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 GMPPBQ9Y5P6 360 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 DNAH7Q8WXX0 4024 aa14.73□□□□□ -0.05
TOP3A-220ENST00000585031 CDC42EP2O14613 210 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 SLC16A7O60669 478 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 MITFO75030 526 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-220ENST00000585031 ACSM4P0C7M7 580 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 AMY2BP19961 511 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 ST3GAL3Q11203 375 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 OR8G1Q15617 311 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 KCNMB1Q16558 191 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 C11orf91Q3C1V1 193 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 RBM48Q5RL73 367 aaKnown RBP14.72□□□□□ -0.05
TOP3A-220ENST00000585031 ZNF691Q5VV52 312 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-220ENST00000585031 OAFQ86UD1 273 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 GLB1L2Q8IW92 636 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 AQP11Q8NBQ7 271 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 BEND2Q8NDZ0 799 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 WIPF2Q8TF74 440 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-220ENST00000585031 SSX3Q99909 188 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 SYT4Q9H2B2 425 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 SERTAD4Q9NUC0 356 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 VSX1Q9NZR4 365 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-220ENST00000585031 BLOC1S6Q9UL45 172 aa14.72□□□□□ -0.05
TOP3A-220ENST00000585031 HUWE1Q7Z6Z7 4374 aaKnown RBP14.71□□□□□ -0.05
TOP3A-220ENST00000585031 TRBV4-1A0A0J9YWV2 114 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 DCTN6O00399 190 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 CLIC3O95833 236 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 CD14P08571 375 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 SELLP14151 372 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 SLC9A3P48764 834 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 DEFB121Q5J5C9 76 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 TEX36Q5VZQ5 186 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 HCP5Q6MZN7 132 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 PTCHD4Q6ZW05 846 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 C11orf53Q8IXP5 236 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 FAM216BQ8N7L0 139 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 OR9Q2Q8NGE9 314 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 OR4C13Q8NGP0 309 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 OR2T6Q8NHC8 308 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 TSSK2Q96PF2 358 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 PITX2Q99697 317 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 CITED2Q99967 270 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-220ENST00000585031 OCSTAMPQ9BR26 566 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 KRTAP17-1Q9BYP8 105 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 KRCC1Q9NPI7 259 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-220ENST00000585031 GRHPRQ9UBQ7 328 aa14.71□□□□□ -0.05
TOP3A-220ENST00000585031 A0A087WXM4 84 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.7□□□□□ -0.06
TOP3A-220ENST00000585031 FBXO24O75426 580 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 KHDRBS3O75525 346 aaKnown RBP14.7□□□□□ -0.06
TOP3A-220ENST00000585031 PAHP00439 452 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 GRPP07492 148 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 EEF1B2P24534 225 aaKnown RBP14.7□□□□□ -0.06
TOP3A-220ENST00000585031 ESRRGP62508 458 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 PRKCDQ05655 676 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 WDR38Q5JTN6 314 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 CFAP77Q6ZQR2 320 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 RRM2BQ7LG56 351 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 TSPAN14Q8NG11 270 aa14.7□□□□□ -0.06
TOP3A-220ENST00000585031 PIFOQ8TCI5 191 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms