RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 SCO1O75880 301 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 PLEKHA8P1O95397 391 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TGM6O95932 706 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 CYB5R3P00387 301 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 IGLV3-25P01717 112 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TRBV12-3P01733 135 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC35G6P0C7Q6 338 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 CXCR1P25024 350 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 LOXP28300 417 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC35B1P78383 322 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 ST3GAL4Q11206 333 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TRDNQ13061 729 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 MOBPQ13875 183 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SHHQ15465 462 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC25A35Q3KQZ1 300 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 FAM222AQ5U5X8 452 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 RNF182Q8N6D2 247 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SPANXA2-OT1Q8N9U9 137 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR5T1Q8NG75 326 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR51L1Q8NGJ5 315 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR13C9Q8NGT0 318 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TMEM234Q8WY98 164 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR8D1Q8WZ84 308 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TOP1MTQ969P6 601 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 MRPL48Q96GC5 212 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SNF8Q96H20 258 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR4K3Q96R72 315 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TSNAXQ99598 290 aaKnown RBP2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TMEM175Q9BSA9 504 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TIMM29Q9BSF4 260 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OSBPL11Q9BXB4 747 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 RSPO3Q9BXY4 272 aaPredicted RBP2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 OR51B5Q9H339 312 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 C6orf50Q9HD87 102 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 C21orf62Q9NYP8 219 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 FLVCR2Q9UPI3 526 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 SIGLEC7Q9Y286 467 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF835Q9Y2P0 537 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 LRRC42Q9Y546 428 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 KPTNQ9Y664 436 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 TNS2Q63HR2 1409 aa2.14□□□□□ -2.07
SMCHD1-209ENST00000583441 IGKV1-27A0A075B6S5 117 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 TRAV8-4A0A0B4J246 113 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 IGHV1-3A0A0C4DH29 117 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 H7C2Y5 167 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 M0R1X1 148 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 GATCO43716 136 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 KDELR3O43731 214 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 P01737 135 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 PRSS3P35030 304 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 PAFAH1B2P68402 229 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC35A1P78382 337 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 ATP6V1FQ16864 119 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 C6orf99Q4VX62 202 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 CPTPQ5TA50 214 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 FAM58AQ8N1B3 248 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 DRAM1Q8N682 238 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF709Q8N972 641 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 ZFAND1Q8TCF1 268 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 RXFP2Q8WXD0 754 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 BAALCQ8WXS3 180 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 GHSRQ92847 366 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 UBE2E2Q96LR5 201 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 CDX2Q99626 313 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 NUDT9Q9BW91 350 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 TM6SF2Q9BZW4 377 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 FBXO6Q9NRD1 293 aaPredicted RBP2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 HEBP1Q9NRV9 189 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 NDRG2Q9UN36 371 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 CFL2Q9Y281 166 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 BZW2Q9Y6E2 419 aaKnown RBP2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 ARID1AO14497 2285 aa2.13□□□□□ -2.07
SMCHD1-209ENST00000583441 KIF27Q86VH2 1401 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 IGHV2OR16-5A0A0B4J2B6 119 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 LOC100653049A0A140TA62 436 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 A0A1W2PQ67 120 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 E7EWF7 191 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 KRT34O76011 436 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ARR3P36575 388 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 NUP62P37198 522 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 HCCSP53701 268 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 CARD18P57730 90 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF616Q08AN1 781 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 INCA1Q0VD86 236 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 DNLZQ5SXM8 178 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 TMEM236Q5W0B7 351 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 SLC7A5P1Q8MH63 180 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ZNF645Q8N7E2 425 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 APCDD1LQ8NCL9 501 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 OR4M2Q8NGB6 313 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 C1orf50Q9BV19 199 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ARV1Q9H2C2 271 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ZSCAN16Q9H4T2 348 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 WDR55Q9H6Y2 383 aaPredicted RBP2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 PLEKHF2Q9H8W4 249 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 FBXO8Q9NRD0 319 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 ZMAT5Q9UDW3 170 aaKnown RBP2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 KLF12Q9Y4X4 402 aa2.12□□□□□ -2.07
SMCHD1-209ENST00000583441 NPHP4O75161 1426 aaPredicted RBP2.11□□□□□ -2.07
SMCHD1-209ENST00000583441 SMC2O95347 1197 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms