RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 EVX1P49640 407 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 KLF3P57682 345 aaPredicted RBP13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 VBP1P61758 197 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NCS1P62166 190 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CLVS2Q5SYC1 327 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FOXB2Q5VYV0 432 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR8G5Q8NG78 346 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PP6455Q8WZ26 134 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 C14orf79Q96F83 325 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SYT3Q9BQG1 590 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CHST5Q9GZS9 411 aa13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MYEF2Q9P2K5 600 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 RSL24D1Q9UHA3 163 aaKnown RBP13.97□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PLCE1Q9P212 2302 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TRAV8-7A0A075B6U6 113 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 A0A1W2PPR1 153 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CCDC160A6NGH7 325 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ANKRD30BLA7E2S9 258 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF850A8MQ14 1090 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ZNF701M0R085 212 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TIMM8AO60220 97 aaPredicted RBP13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 NRASP01111 189 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ATF1P18846 271 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FSTP19883 344 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 UBE2V2Q15819 145 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MOGQ16653 247 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 MOB3CQ70IA8 216 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 LRRTM1Q86UE6 522 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FTMTQ8N4E7 242 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 BHLHE23Q8NDY6 225 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 OR1M1Q8NGA1 313 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 C12orf43Q96C57 262 aaKnown RBP13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SLC30A2Q9BRI3 323 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 FAM192AQ9GZU8 254 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PLK3Q9H4B4 646 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 PPP1R3EQ9H7J1 279 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TCF7L1Q9HCS4 588 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 SNTG1Q9NSN8 517 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TMEM100Q9NV29 134 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 TAAR3PQ9P1P4 343 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 CKLFQ9UBR5 152 aa13.96□□□□□ -0.17
CDK5RAP3-228ENST00000583363 ROS1P08922 2347 aa13.96□□□□□ -0.18
CDK5RAP3-228ENST00000583363 IGKV1-9A0A0C4DH69 117 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 A0A1B0GWJ7 208 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 H3BMQ9 156 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 NOL3O60936 208 aaKnown RBP13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 RAB3AP20336 220 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MTNR1BP49286 362 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 PRDX4Q13162 271 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 EFNB3Q15768 340 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MST1LQ2TV78 715 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CDH24Q86UP0 819 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 UBASH3BQ8TF42 649 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SLITRK2Q9H156 845 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 GPR173Q9NS66 373 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MPC1Q9Y5U8 109 aa13.95□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MEGF11A6BM72 1044 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SLC22A1O15245 554 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CTAG2O75638 210 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CDRT1O95170 752 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 ALDOBP05062 364 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CA6P23280 308 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MYL9P24844 172 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SDC2P34741 201 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MMP15P51511 669 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 TLE4Q04727 773 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CEP78Q5JTW2 689 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 Q6ZR03 302 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 TPRA1Q86W33 373 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 OR51A2Q8NGJ7 313 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 OR13C9Q8NGT0 318 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 OR13G1Q8NGZ3 307 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 TECTBQ96PL2 329 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 PAPOLGQ9BWT3 736 aaKnown RBP13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SLC22A4Q9H015 551 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 GPR160Q9UJ42 338 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 ITPR3Q14573 2671 aa13.94□□□□□ -0.18
CDK5RAP3-228ENST00000583363 A0A1W2PPW3 197 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 TRIM64BA6NI03 449 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 B9A039 149 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 HS3ST1O14792 307 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SULT1B1O43704 296 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 MAS1P04201 325 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CD37P11049 281 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 ADRA2CP18825 462 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 BDKRB2P30411 391 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 RPS19P39019 145 aaKnown RBP13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SERPINB10P48595 397 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 PPP3R1P63098 170 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SPCS2Q15005 226 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 SWI5Q1ZZU3 235 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 CEACAM21Q3KPI0 293 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 DMRTC1Q5HYR2 192 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 USP43Q70EL4 1123 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 ZDHHC23Q8IYP9 409 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 FBXL14Q8N1E6 418 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 NDNFQ8TB73 568 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 OR5P3Q8WZ94 311 aa13.93□□□□□ -0.18
CDK5RAP3-228ENST00000583363 FBXW5Q969U6 566 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms