RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 SLC2A5P22732 501 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 CA6P23280 308 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 PEX2P28328 305 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 PYCR1P32322 319 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 GGT2P36268 569 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 ECH1Q13011 328 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 PCK2Q16822 640 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 SLC25A30Q5SVS4 291 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 LPCAT4Q643R3 524 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 HIST2H2BDQ6DRA6 164 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 SLC18B1Q6NT16 456 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 BTN2A1Q7KYR7 527 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 MRPL21Q7Z2W9 205 aaKnown RBP11.18□□□□□ -0.62
SS18-222ENST00000582792 NAA40Q86UY6 237 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 CPOQ8IVL8 374 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 BOLLQ8N9W6 283 aaKnown RBP11.18□□□□□ -0.62
SS18-222ENST00000582792 OR9Q1Q8NGQ5 310 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 MBOAT4Q96T53 435 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 ATF6BQ99941 703 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 ADAT1Q9BUB4 502 aaKnown RBP11.18□□□□□ -0.62
SS18-222ENST00000582792 VCXQ9H320 206 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 MRPL22Q9NWU5 206 aaKnown RBP11.18□□□□□ -0.62
SS18-222ENST00000582792 NKX1-2Q9UD57 310 aaPredicted RBP11.18□□□□□ -0.62
SS18-222ENST00000582792 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
SS18-222ENST00000582792 FAM183AA6NL82 134 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 CD300LBA8K4G0 201 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 DLGAP1O14490 977 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 DVL1O14640 695 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 PRKYO43930 277 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 TSPAN9O75954 239 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 ECDO95905 644 aaPredicted RBP11.17□□□□□ -0.62
SS18-222ENST00000582792 GYPAP02724 150 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 ZNF823P16415 610 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 GSTT1P30711 240 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 SNRPGP62308 76 aaKnown RBP11.17□□□□□ -0.62
SS18-222ENST00000582792 TMED1Q13445 227 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 CDONQ4KMG0 1287 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 AADACL4Q5VUY2 407 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 NXNL2Q5VZ03 156 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 DHRS7BQ6IAN0 325 aaPredicted RBP11.17□□□□□ -0.62
SS18-222ENST00000582792 PLBD1Q6P4A8 553 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 FAM90A1Q86YD7 464 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 LINC00346Q8IVM7 164 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 GID4Q8IVV7 300 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 PDZD9Q8IXQ8 264 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 TCEANCQ8N8B7 351 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 ZNRF4Q8WWF5 429 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 CNTD2Q9H8S5 307 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 PNRC2Q9NPJ4 139 aaKnown RBP11.17□□□□□ -0.62
SS18-222ENST00000582792 FAM118AQ9NWS6 357 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 HAO2Q9NYQ3 351 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 KAAG1Q9UBP8 84 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 CYB5R1Q9UHQ9 305 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 FAM96BQ9Y3D0 163 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 KPTNQ9Y664 436 aa11.17□□□□□ -0.62
SS18-222ENST00000582792 LOC100130705A0A1B0GUX0 176 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 A0A1B0GVI7 797 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 MPZL2O60487 215 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 HLA-DQA2P01906 255 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 CSF1P09603 554 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 CLUP10909 449 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 ENTPD1P49961 510 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 TPTEP56180 551 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 BEAN1Q3B7T3 259 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 ZIK1Q3SY52 487 aaPredicted RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 LCN1P1Q5VSP4 162 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 MEPCEQ7L2J0 689 aaKnown RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 VMO1Q7Z5L0 202 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 GALNT4Q8N4A0 578 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 GCSAMQ8N6F7 178 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 ZNF555Q8NEP9 628 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 OR2AJ1Q8NGZ0 328 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 NPRL2Q8WTW4 380 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 TEAD3Q99594 435 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 OR51V1Q9H2C8 321 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 VCX3BQ9H321 246 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 MED20Q9H944 212 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 C1orf123Q9NWV4 160 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 H2AFY2Q9P0M6 372 aaPredicted RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 ZNRD1Q9P1U0 126 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 RPUSD1Q9UJJ7 312 aaKnown RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 VPREB3Q9UKI3 123 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 CAB39Q9Y376 341 aaPredicted RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 RRP15Q9Y3B9 282 aaKnown RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 GMPPBQ9Y5P6 360 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 COMMD3-BMI1R4GMX3 469 aa11.16□□□□□ -0.62
SS18-222ENST00000582792 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
SS18-222ENST00000582792 ZNF816-ZNF321PA0A0X1KG74 233 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 BTBD17A6NE02 478 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 G3V4G9 280 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 H0YAE9 185 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 M0R135 149 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 ATP6V1G2O95670 118 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 LHBP01229 141 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 GYPBP06028 91 aa11.15□□□□□ -0.62
SS18-222ENST00000582792 FBP1P09467 338 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms