RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 TMEM106BQ9NUM4 274 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 MRPL22Q9NWU5 206 aaKnown RBP8.98□□□□□ -0.97
TOP3A-210ENST00000580713 ERGIC3Q9Y282 383 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 RYR3Q15413 4870 aa8.98□□□□□ -0.97
TOP3A-210ENST00000580713 C5orf63A6NC05 138 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ZSCAN5BA6NJL1 495 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ZNF593O00488 134 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MYL12BO14950 172 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 OR2T7P0C7T2 308 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 LIMS3P0CW19 117 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 LIMS4P0CW20 117 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 PPIAL4GP0DN37 164 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 CD33P20138 364 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 APLNRP35414 380 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MPV17P39210 176 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ENTPD1P49961 510 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ETV1P50549 477 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 PROK1P58294 105 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 TNFAIP6P98066 277 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MEP1BQ16820 701 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 TMEM155Q4W5P6 130 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 SPRNQ5BIV9 151 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 GPR157Q5UAW9 335 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 Q6YL49 198 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 SLC16A14Q7RTX9 510 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 DPY19L4Q7Z388 723 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 LRRC28Q86X40 367 aaPredicted RBP8.97□□□□□ -0.97
TOP3A-210ENST00000580713 OR2T27Q8NH04 317 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MRPL48Q96GC5 212 aaKnown RBP8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MNTQ99583 582 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 MND1Q9BWT6 205 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 YIPF3Q9GZM5 350 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 WDR76Q9H967 626 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ACOT13Q9NPJ3 140 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 CYSLTR2Q9NS75 346 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 ERVK13-1Q9NX77 482 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 CLEC2DQ9UHP7 191 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 UGT2A1Q9Y4X1 527 aa8.97□□□□□ -0.97
TOP3A-210ENST00000580713 A0A1W2PQL4 384 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 ZNF670-ZNF695F2Z2N8 137 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 F5H0A9 414 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 PHYHO14832 338 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 TFAP2AP05549 437 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 MELTFP08582 738 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 SPARCP09486 303 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 JUNBP17275 347 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 MSR1P21757 451 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 CDAP32320 146 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 RPL5P46777 297 aaKnown RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 MMP15P51511 669 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 HCCSP53701 268 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 BTG1P62324 171 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 GALEQ14376 348 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 KCNMB1Q16558 191 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 SGCAQ16586 387 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 SLC36A2Q495M3 483 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 TEX30Q5JUR7 227 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 OTPQ5XKR4 325 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 XAF1Q6GPH4 301 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 FOXL2NBQ6ZUU3 175 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 C1orf174Q8IYL3 243 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 TMEM86BQ8N661 226 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 NANOGP1Q8N7R0 232 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 OTOSQ8NHW6 89 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 TBC1D15Q8TC07 691 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 RAB40AQ8WXH6 277 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 FCGR1BQ92637 280 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 RORBQ92753 470 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 FAM71F1Q96KD3 344 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 MYCBPQ99417 103 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 ALG8Q9BVK2 526 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 CDADC1Q9BWV3 514 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 SSBP3Q9BWW4 388 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 PRDM13Q9H4Q3 707 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 MSL2Q9HCI7 577 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 EMC7Q9NPA0 242 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 POLE4Q9NR33 117 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 EIF3KQ9UBQ5 218 aaKnown RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 KCNG2Q9UJ96 466 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 LAMP5Q9UJQ1 280 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 ZDHHC8Q9ULC8 765 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 COPS3Q9UNS2 423 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 POLR1DQ9Y2S0 133 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 CAB39Q9Y376 341 aaPredicted RBP8.96□□□□□ -0.98
TOP3A-210ENST00000580713 TMEM14AQ9Y6G1 99 aa8.96□□□□□ -0.98
TOP3A-210ENST00000580713 IGHV2-70DA0A0C4DH43 119 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 GPR137BO60478 399 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 SCG5P05408 212 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 PSKH1P11801 424 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 TNFSF4P23510 183 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 PSMB9P28065 219 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 LIPAP38571 399 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 RPS27P42677 84 aaKnown RBP8.95□□□□□ -0.98
TOP3A-210ENST00000580713 ALDH3B2P48448 385 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 WNT4P56705 351 aa8.95□□□□□ -0.98
TOP3A-210ENST00000580713 RPL15P61313 204 aaKnown RBP8.95□□□□□ -0.98
TOP3A-210ENST00000580713 LSM6P62312 80 aaKnown RBP8.95□□□□□ -0.98
TOP3A-210ENST00000580713 ACTA2P62736 377 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms