RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 BRD3OSQ6XYD6 125 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 CMTM4Q8IZR5 234 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 C19orf18Q8NEA5 215 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 ASB17Q8WXJ9 295 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 CCDC124Q96CT7 223 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 MED30Q96HR3 178 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 RAB3IPQ96QF0 476 aaPredicted RBP11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 AMELYQ99218 206 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 MNTQ99583 582 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 PCGF1Q9BSM1 259 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 THTPAQ9BU02 230 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 PAPOLGQ9BWT3 736 aaKnown RBP11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 OR51V1Q9H2C8 321 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 MED20Q9H944 212 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 BEX1Q9HBH7 125 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 NOTCH1P46531 2555 aa11.97□□□□□ -0.49
SMARCE1-216ENST00000580419 OR5B21A6NL26 309 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 IGLV3-1P01715 115 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 SFTPBP07988 381 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 MELTFP08582 738 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 MAP2K3P46734 347 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 LRRC10Q5BKY1 277 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 WDR38Q5JTN6 314 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 FAHD1Q6P587 224 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 ZNF788Q6ZQV5 615 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 TRPM8Q7Z2W7 1104 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 TMEM179BQ7Z7N9 219 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 CPOQ8IVL8 374 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 IQCF1Q8N6M8 205 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 LRTOMTQ8WZ04 291 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 DCTN5Q9BTE1 182 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 PRRG3Q9BZD7 231 aa11.96□□□□□ -0.49
SMARCE1-216ENST00000580419 ZNF816-ZNF321PA0A0X1KG74 233 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 DHRS7CA6NNS2 312 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 M0R1W7 72 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 CDIPTO14735 213 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 NDUFB3O43676 98 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 CRYBA1P05813 215 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 ACKR3P25106 362 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 ESRRGP62508 458 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 GNG3P63215 75 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 PRDX4Q13162 271 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 FLOT2Q14254 428 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 Q6ZSR3 168 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 ZDHHC23Q8IYP9 409 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 ZNF679Q8IYX0 411 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 BOLLQ8N9W6 283 aaKnown RBP11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 OR5A2Q8NGI9 324 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 ANGPTL6Q8NI99 470 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 THEM6Q8WUY1 208 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 CLPTM1LQ96KA5 538 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 DUX5Q96PT3 197 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 TEAD3Q99594 435 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 PKP2Q99959 881 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 MROQ9BYG7 248 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 DPAGT1Q9H3H5 408 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 RASL12Q9NYN1 266 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 LAMP5Q9UJQ1 280 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 LRP12Q9Y561 859 aa11.95□□□□□ -0.5
SMARCE1-216ENST00000580419 IGHV3OR16-10A0A075B7F0 116 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 TRBV23-1A0A0A0MS06 115 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 DYNC1I1O14576 645 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 SIGLEC5O15389 551 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 GYG2O15488 501 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 SELENOFO60613 162 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 FKBP6O75344 327 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 ACAA1P09110 424 aaPredicted RBP11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 AMY2BP19961 511 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 POU1F1P28069 291 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 IER3P46695 156 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 RAG2P55895 527 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 ARF6P62330 175 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 CSNK2BP67870 215 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 CBX1P83916 185 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 EFNB1P98172 346 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 ACSM1Q08AH1 577 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 CEACAM21Q3KPI0 293 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 SCCPDHQ8NBX0 429 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 OR8B12Q8NGG6 310 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 WFDC12Q8WWY7 111 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 OTULINQ96BN8 352 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 LYZL4Q96KX0 146 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 HIST1H2AAQ96QV6 131 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 CHIAQ9BZP6 476 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 MOB1AQ9H8S9 216 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 FAM206AQ9NX38 181 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 DNAJC27Q9NZQ0 273 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 NUFIP1Q9UHK0 495 aaKnown RBP11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 ENOPH1Q9UHY7 261 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 POMPQ9Y244 141 aa11.94□□□□□ -0.5
SMARCE1-216ENST00000580419 CMYA5Q8N3K9 4069 aa11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 CLPSL1A2RUU4 121 aa11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 NKX6-3A6NJ46 265 aa11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 MTRF1O75570 445 aaKnown RBP11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 FBP1P09467 338 aa11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 CRISP1P54107 249 aa11.93□□□□□ -0.5
SMARCE1-216ENST00000580419 ACTR3P61158 418 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms