RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 DPF1Q92782 380 aa11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 UTP4Q969X6 686 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 SLCO4A1Q96BD0 722 aa11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 DUS3LQ96G46 650 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 ZNF570Q96NI8 536 aa11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 GPX7Q96SL4 187 aaPredicted RBP11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 METTL8Q9H825 291 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 ARMC1Q9NVT9 282 aa11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 GAR1Q9NY12 217 aaKnown RBP11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 DNAJB11Q9UBS4 358 aa11.21□□□□□ -0.61
CSNK1D-211ENST00000579316 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 ANGPTL7O43827 346 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 PTP4A3O75365 173 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 TIPRLO75663 272 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 LMO1P25800 156 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 BMXP51813 675 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 ACTR3P61158 418 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 LSM6P62312 80 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 FHL1Q13642 323 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 OR8G1Q15617 311 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 RFX4Q33E94 735 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 KRTAP27-1Q3LI81 207 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 ZNF770Q6IQ21 691 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 ZFP1Q6P2D0 407 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 LRRC75AQ8NAA5 344 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 MAP6Q96JE9 813 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 NKX3-1Q99801 234 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 COQ7Q99807 217 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 DGCR6LQ9BY27 220 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 OR52D1Q9H346 318 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 ZNF556Q9HAH1 456 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 C1orf123Q9NWV4 160 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 VNN3Q9NY84 501 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 NKX1-2Q9UD57 310 aaPredicted RBP11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 CDH10Q9Y6N8 788 aa11.2□□□□□ -0.62
CSNK1D-211ENST00000579316 PLECQ15149 4684 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 RER1O15258 196 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 AHCYL1O43865 530 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 GMDSO60547 372 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 GASTP01350 101 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 MUC1P15941 1255 aaPredicted RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 CA6P23280 308 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 NOS3P29474 1203 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 SDHAP31040 664 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 PRSS12P56730 875 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 HIST1H3AP68431 136 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 POU4F2Q12837 409 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 KRR1Q13601 381 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 KPNB1Q14974 876 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 ATP6AP1Q15904 470 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 ZSCAN26Q16670 478 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 WDR38Q5JTN6 314 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 RASSF6Q6ZTQ3 369 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 HIST2H3AQ71DI3 136 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 SLC36A1Q7Z2H8 476 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 ADCK1Q86TW2 530 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 FAM216BQ8N7L0 139 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 CCL13Q99616 98 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 IFT27Q9BW83 186 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 HDHD2Q9H0R4 259 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 NRIP3Q9NQ35 241 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 SF3B6Q9Y3B4 125 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 ADAM18Q9Y3Q7 739 aa11.19□□□□□ -0.62
CSNK1D-211ENST00000579316 IGHV3OR15-7A0A075B7D8 119 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 TEX13CA0A0J9YWL9 993 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 H7C1C5 153 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 IMPA2O14732 288 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 IDH3BO43837 385 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 ANXA8P13928 327 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 CTLA4P16410 223 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 TGM4P49221 684 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 LCN6P62502 163 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 RSPO1Q2MKA7 263 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 DMRTC1Q5HYR2 192 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 ZNF826PQ6ZT77 177 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 FAM122BQ7Z309 247 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 SDR9C7Q8NEX9 313 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 OR5K1Q8NHB7 308 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 SPRYD4Q8WW59 207 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 DNAJC9Q8WXX5 260 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 Q96M85 177 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 ERMAPQ96PL5 475 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 FEVQ99581 238 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 TBC1D23Q9NUY8 699 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 IER3IP1Q9Y5U9 82 aa11.18□□□□□ -0.62
CSNK1D-211ENST00000579316 VGLL3A8MV65 326 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 ARPC3O15145 178 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 NDUFB3O43676 98 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 PEX14O75381 377 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 PAICSP22234 425 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 FXYD6P3P58550 94 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 CNN3Q15417 329 aaKnown RBP11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 PCK2Q16822 640 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 MICBQ29980 383 aa11.17□□□□□ -0.62
CSNK1D-211ENST00000579316 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms