RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 DCAF16Q9NXF7 216 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 NKIRAS2Q9NYR9 191 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 ERVK-18Q9QC07 812 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 LAMP5Q9UJQ1 280 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 LAMP3Q9UQV4 416 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 SF3B6Q9Y3B4 125 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 RHBDD3Q9Y3P4 386 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 RPL36Q9Y3U8 105 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 CMAHPQ9Y471 501 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 DMRT1Q9Y5R6 373 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 CACNG2Q9Y698 323 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM14AQ9Y6G1 99 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 FN1P02751 2386 aaKnown RBP3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 MXRA5Q9NR99 2828 aa3.2□□□□□ -1.9
SMARCE1-215ENST00000578995 CSPG4Q6UVK1 2322 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SONP18583 2426 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 IGKV1-27A0A075B6S5 117 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 IGKV1-9A0A0C4DH69 117 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TRBV5-5A0A0J9YX44 114 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM269A0A1B0GVZ9 245 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 LOC107986453A0A1B0GWG9 222 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 DAPL1A0PJW8 107 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 EFCAB10A6NFE3 127 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 DHRS7CA6NNS2 312 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CD300LBA8K4G0 201 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 LOC110117498-PIK3R3F6TDL0 507 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 M0R233 179 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 XRCC2O43543 280 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ZFPL1O95159 310 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 FADS2O95864 444 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CST4P01036 141 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 LCATP04180 440 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CD1AP06126 327 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 LCKP06239 509 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SMIM18P0DKX4 95 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CD37P11049 281 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 NAT2P11245 290 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SELEP16581 610 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CCNOP22674 350 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 GIFP27352 417 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CD200P41217 278 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 GUCA1AP43080 201 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 RIDAP52758 137 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CDH15P55291 814 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 GABARAPL2P60520 117 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 RPS23P62266 143 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 HOXA4Q00056 320 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 RIN1Q13671 783 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ALKBH1Q13686 389 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TBCEQ15813 527 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SSX1Q16384 188 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 KCTD21Q4G0X4 260 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 KLHL22Q53GT1 634 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 FAM76BQ5HYJ3 339 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 RBM48Q5RL73 367 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 AGAP6Q5VW22 663 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SPNS3Q6ZMD2 512 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 KCTD20Q7Z5Y7 419 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 KRT77Q7Z794 578 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR5AS1Q8N127 324 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 FBXL14Q8N1E6 418 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF283Q8N7M2 679 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 WFDC11Q8NEX6 87 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 BPIFB6Q8NFQ5 453 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR8G5Q8NG78 346 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR52H1Q8NGJ2 320 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR13C5Q8NGS8 318 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR51E1Q8TCB6 317 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 PIGTQ969N2 578 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ADAT3Q96EY9 351 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TMEM80Q96HE8 168 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 REEP6Q96HR9 211 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OPALINQ96PE5 141 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CCL19Q99731 98 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 MROQ9BYG7 248 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TLNRD1Q9H1K6 362 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 VCX3BQ9H321 246 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TPK1Q9H3S4 243 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 RGCCQ9H4X1 137 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OPA3Q9H6K4 179 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 MSL2Q9HCI7 577 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 GPR84Q9NQS5 396 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 H2AFY2Q9P0M6 372 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 TAAR3PQ9P1P4 343 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CGGBP1Q9UFW8 167 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 ZNF391Q9UJN7 358 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 OR52A1Q9UKL2 312 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 IKZF2Q9UKS7 526 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 CAB39Q9Y376 341 aaPredicted RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 EXOSC1Q9Y3B2 195 aaKnown RBP3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 PCDHGB1Q9Y5G3 927 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 SNX5Q9Y5X3 404 aa3.19□□□□□ -1.9
SMARCE1-215ENST00000578995 MTORP42345 2549 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 IGHV4-30-2A0A087WSY4 118 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 TRBV5-7A0A0A0MS05 114 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 PQLC2LA1A4F0 135 aa3.18□□□□□ -1.9
SMARCE1-215ENST00000578995 IRGMA1A4Y4 181 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 152.7 ms