RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 RENP00797 406 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 HLA-DQA2P01906 255 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SEMG1P04279 462 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SFTPBP07988 381 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SLC2A1P11166 492 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CA6P23280 308 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CRABP1P29762 137 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 RRM2P31350 389 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SLC6A6P31641 620 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 PITPNBP48739 271 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 RAD23AP54725 363 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ELF3P78545 371 aaPredicted RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.16□□□□□ -1.58
NUP88-212ENST00000576708 TRAP1Q12931 704 aaKnown RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 PPP1R8Q12972 351 aaKnown RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 SNAI3Q3KNW1 292 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 WDR25Q64LD2 544 aaPredicted RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 DNM1P34Q6PK57 102 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 BTNL3Q6UXE8 466 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 LRRN1Q6UXK5 716 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ZNF841Q6ZN19 808 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ZNF826PQ6ZT77 177 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 FGFRL1Q8N441 504 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CYB561A3Q8NBI2 242 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 OR8B3Q8NGG8 313 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 OR2AE1Q8NHA4 323 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SLC25A28Q96A46 364 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 UPRTQ96BW1 309 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 PYURFQ96I23 114 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 RBM14Q96PK6 669 aaKnown RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 OR8B2Q96RD0 313 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ATF6BQ99941 703 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 PCGF1Q9BSM1 259 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 HCAR1Q9BXC0 346 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 FAM107BQ9H098 131 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 NSRP1Q9H0G5 558 aaKnown RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 EGLN3Q9H6Z9 239 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 MARCH7Q9H992 704 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CTSZQ9UBR2 303 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CLN8Q9UBY8 286 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 MIOXQ9UGB7 285 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 CYB5R1Q9UHQ9 305 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 ATPIF1Q9UII2 106 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 SAMD4AQ9UPU9 718 aaKnown RBP5.16□□□□□ -1.58
NUP88-212ENST00000576708 MYRFQ9Y2G1 1151 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 MEGF8Q7Z7M0 2845 aa5.16□□□□□ -1.58
NUP88-212ENST00000576708 IGHV3OR15-7A0A075B7D8 119 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 A0A1B0GW55 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 LRRC30A6NM36 301 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CD300LBA8K4G0 201 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 IFNL4K9M1U5 179 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 NDUFAB1O14561 156 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 ARPC3O15145 178 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GMNNO75496 209 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GYPBP06028 91 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GRPP07492 148 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L2P0CJ85 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L3P0CJ86 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L4P0CJ87 422 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L5P0CJ88 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L6P0CJ89 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L7P0CJ90 424 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CLUP10909 449 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 IRF2P14316 349 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PSMB10P40306 273 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CD200P41217 278 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 MTNR1AP48039 350 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GSSP48637 474 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PRKXP51817 358 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 ZNF92Q03936 586 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PRB3Q04118 309 aaPredicted RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 CNN3Q15417 329 aaKnown RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 OR8G1Q15617 311 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 ZNF181Q2M3W8 571 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 BEAN1Q3B7T3 259 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 SLC36A3Q495N2 470 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GLYATL3Q5SZD4 288 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PGBD2Q6P3X8 592 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DUX4L9Q6RFH8 374 aaPredicted RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 ZNF620Q6ZNG0 422 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 C9orf139Q6ZV77 190 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PGAP1Q75T13 922 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 MRPL21Q7Z2W9 205 aaKnown RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 LNX2Q8N448 690 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 KIR3DL3Q8N743 410 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 OR9Q2Q8NGE9 314 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 OR8D4Q8NGM9 314 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 OR9Q1Q8NGQ5 310 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 OR2AJ1Q8NGZ0 328 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 GNPDA2Q8TDQ7 276 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 SPRYD4Q8WW59 207 aaPredicted RBP5.15□□□□□ -1.59
NUP88-212ENST00000576708 TMIGD2Q96BF3 282 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CMTM5Q96DZ9 223 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 PLEKHA8Q96JA3 519 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 TECTBQ96PL2 329 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 TBX15Q96SF7 602 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 CDRT15Q96T59 188 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 DDOQ99489 341 aa5.15□□□□□ -1.59
NUP88-212ENST00000576708 MMADHCQ9H3L0 296 aaPredicted RBP5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms