RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 CRIP3Q6Q6R5 217 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 FAM89BQ8N5H3 189 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 SCGB3A2Q96PL1 93 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 NRIP2Q9BQI9 281 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 EHFQ9NZC4 300 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 PMS2P1A4D2B8 440 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 KLK2P20151 261 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 RFC3P40938 356 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 HOXA1P49639 335 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-206ENST00000573852 S100A10P60903 97 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 CARFQ8N187 725 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 ZNF283Q8N7M2 679 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 NPRL2Q8WTW4 380 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 LIN37Q96GY3 246 aaPredicted RBP16.79■□□□□ 0.28
SCARF1-206ENST00000573852 SMIM8Q96KF7 97 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 MRGPRX4Q96LA9 322 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 ESRP2Q9H6T0 727 aaKnown RBP16.79■□□□□ 0.28
SCARF1-206ENST00000573852 SDHAF3Q9NRP4 125 aa16.79■□□□□ 0.28
SCARF1-206ENST00000573852 RCC2Q9P258 522 aaKnown RBP16.79■□□□□ 0.28
SCARF1-206ENST00000573852 MYO7BQ6PIF6 2116 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 TRBV11-1A0A0K0K1C0 115 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 LRP3O75074 770 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 RCC1P18754 421 aaPredicted RBP16.78■□□□□ 0.28
SCARF1-206ENST00000573852 CBX5P45973 191 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 NXPH1P58417 271 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 DOK3Q7L591 496 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 SLC38A9Q8NBW4 561 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 OR14K1Q8NGZ2 314 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 RNF138Q8WVD3 245 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 SEMA5BQ9P283 1151 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 NCOA6Q14686 2063 aaPredicted RBP16.78■□□□□ 0.28
SCARF1-206ENST00000573852 FOXI3A8MTJ6 420 aaPredicted RBP16.78■□□□□ 0.28
SCARF1-206ENST00000573852 PIAS2O75928 621 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 FARS2O95363 451 aaKnown RBP16.78■□□□□ 0.28
SCARF1-206ENST00000573852 QDPRP09417 244 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 NAT2P11245 290 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 PTGDSP41222 190 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 LPAR6P43657 344 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 CAV2P51636 162 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 SLC25A53Q5H9E4 307 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 FOXRED2Q8IWF2 684 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 OR5B2Q96R09 309 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 TGIF2Q9GZN2 237 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 DNAJB11Q9UBS4 358 aa16.78■□□□□ 0.28
SCARF1-206ENST00000573852 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-206ENST00000573852 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-206ENST00000573852 CSNK1EP49674 416 aaKnown RBP16.77■□□□□ 0.28
SCARF1-206ENST00000573852 KISS1Q15726 138 aa16.77■□□□□ 0.28
SCARF1-206ENST00000573852 SAT2Q96F10 170 aaPredicted RBP16.77■□□□□ 0.28
SCARF1-206ENST00000573852 HPNP05981 417 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 HEXBP07686 556 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 SFTPBP07988 381 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 BLVRBP30043 206 aaPredicted RBP16.77■□□□□ 0.27
SCARF1-206ENST00000573852 OR10G3Q8NGC4 313 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 RHBDD1Q8TEB9 315 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 ZFP57Q9NU63 452 aa16.77■□□□□ 0.27
SCARF1-206ENST00000573852 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 KNG1P01042 644 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 HKR1P10072 659 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 NME2P22392 152 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 PTGFRP43088 359 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 DTX1Q86Y01 620 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 OR6X1Q8NH79 312 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 LYZL4Q96KX0 146 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 PECRQ9BY49 303 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 TAF9BQ9HBM6 251 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 PLA2G2EQ9NZK7 142 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 SERPINA5P05154 406 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 PTGER4P35408 488 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 TAS2R46P59540 309 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 SPEM2Q0P670 501 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 FAM69BQ5VUD6 431 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 OR2A2Q6IF42 318 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 WIF1Q9Y5W5 379 aa16.76■□□□□ 0.27
SCARF1-206ENST00000573852 IGKV1D-8A0A087WSZ0 117 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 MEX3AA1L020 520 aaKnown RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 FIGNL2A6NMB9 653 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 RNASEK-C17orf49H0YIS7 233 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 MED6O75586 246 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 CRYBA1P05813 215 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 B2MP61769 119 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 ACY1Q03154 408 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 PDZK1IP1Q13113 114 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 PNLDC1Q8NA58 520 aaKnown RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 ADPRHL1Q8NDY3 354 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 RXFP4Q8TDU9 374 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 WDR77Q9BQA1 342 aaPredicted RBP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.75■□□□□ 0.27
SCARF1-206ENST00000573852 ADAMTS20P59510 1910 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 WDR87Q6ZQQ6 2873 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 STMND1H3BQB6 276 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 PET100P0DJ07 73 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 SPP1P10451 314 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 PRF1P14222 555 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 ZNF708P17019 499 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 SFTPDP35247 375 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 RAB30Q15771 203 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 FAM189A2Q15884 450 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 KCNMB1Q16558 191 aa16.75■□□□□ 0.27
SCARF1-206ENST00000573852 HIST3H3Q16695 136 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms