RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 ANGPTL7O43827 346 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 CDC14BO60729 498 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ACSM4P0C7M7 580 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 FUT6P51993 359 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 CLDN18P56856 261 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 OR10A3P58181 314 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 TAF9Q16594 264 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ACSF3Q4G176 576 aaPredicted RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 VWA1Q6PCB0 445 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 KCTD9Q7L273 389 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 OR51A2Q8NGJ7 313 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MS4A3Q96HJ5 214 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 THAP7Q9BT49 309 aaPredicted RBP8.88□□□□□ -0.99
SMG6-213ENST00000573166 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 GNG12Q9UBI6 72 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 ZNF69Q9UC07 566 aa8.88□□□□□ -0.99
SMG6-213ENST00000573166 MEIOCA2RUB1 952 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ANXA3P12429 323 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 UGT2B10P36537 528 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 RPS4XP62701 263 aaKnown RBP8.87□□□□□ -0.99
SMG6-213ENST00000573166 PSG4Q00888 419 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 Q6ZS92 163 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 SSX6Q7RTT6 188 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 GCDHQ92947 438 aaPredicted RBP8.87□□□□□ -0.99
SMG6-213ENST00000573166 RAB39BQ96DA2 213 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 GP6Q9HCN6 339 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 TAAR3PQ9P1P4 343 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ETV7Q9Y603 341 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 DENND4AQ7Z401 1863 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 IGLV1-36A0A0B4J1U3 117 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 TMEM8BA6NDV4 472 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 IFITM5A6NNB3 132 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 CD300LBA8K4G0 201 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 L7N2F9 121 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 CHRM2P08172 466 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 CPN1P15169 458 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ERP29P30040 261 aaKnown RBP8.87□□□□□ -0.99
SMG6-213ENST00000573166 CD79BP40259 229 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 CCDC28AQ8IWP9 274 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ELMOD2Q8IZ81 293 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ZNF519Q8TB69 540 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 PIK3IP1Q96FE7 263 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 KLHDC3Q9BQ90 382 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 SPACA1Q9HBV2 294 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 C12orf4Q9NQ89 552 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ABCD4O14678 606 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 BET1O15155 118 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 IGHA1P01876 353 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ATF1P18846 271 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 HTR2BP41595 481 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ADAMTS17Q8TE56 1095 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 SLC25A46Q96AG3 418 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 SPSB1Q96BD6 273 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 ZNF286AQ9HBT8 521 aa8.87□□□□□ -0.99
SMG6-213ENST00000573166 TLN1Q9Y490 2541 aaKnown RBP8.87□□□□□ -0.99
SMG6-213ENST00000573166 AIPO00170 330 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 TOXO94900 526 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 HEXAP06865 529 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 IL7P13232 177 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 MST1P26927 711 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 PRDX4Q13162 271 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 INSL4Q14641 139 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 H3F3CQ6NXT2 135 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 CFAP77Q6ZQR2 320 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 FKBP14Q9NWM8 211 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 CADP27708 2225 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 CHD8Q9HCK8 2581 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 C13orf42A0A1B0GVH6 325 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 NPIPB13A6NJU9 1138 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 NPIPB4C9JG80 1138 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 M0R233 179 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 KLF4O43474 513 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 SPRY1O43609 319 aaPredicted RBP8.86□□□□□ -0.99
SMG6-213ENST00000573166 KNG1P01042 644 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 TK1P04183 234 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 PTGDSP41222 190 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 BAK1Q16611 211 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 Q6ZT83 130 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 FOXRED2Q8IWF2 684 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 C9orf106Q8NAJ2 232 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 NKX3-1Q99801 234 aaPredicted RBP8.86□□□□□ -0.99
SMG6-213ENST00000573166 SPRR3Q9UBC9 169 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 SH2D1BO14796 132 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 NPIPB7O75200 414 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 CNOT4O95628 575 aaKnown RBP8.86□□□□□ -0.99
SMG6-213ENST00000573166 CSF1P09603 554 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 ZNF81P51508 661 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 MMP16P51512 607 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 OR1K1Q8NGR3 316 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 OR6F1Q8NGZ6 308 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 SLC25A40Q8TBP6 338 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 CCL17Q92583 94 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 DERL3Q96Q80 235 aa8.86□□□□□ -0.99
SMG6-213ENST00000573166 ZNF275Q9NSD4 429 aaPredicted RBP8.86□□□□□ -0.99
SMG6-213ENST00000573166 UBE2J1Q9Y385 318 aaPredicted RBP8.86□□□□□ -0.99
SMG6-213ENST00000573166 A0A0B4J203 849 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 A0A1W2PNU3 283 aaPredicted RBP8.85□□□□□ -0.99
SMG6-213ENST00000573166 EFNA2O43921 213 aa8.85□□□□□ -0.99
SMG6-213ENST00000573166 FREM3P0C091 2139 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms