RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 TMED3Q9Y3Q3 217 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 BRWD1Q9NSI6 2320 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 ARHGEF17Q96PE2 2063 aaPredicted RBP13.64□□□□□ -0.23
SMG6-207ENST00000570756 SEC14L6B5MCN3 397 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 E5RGE8 158 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 LY86O95711 162 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 APODP05090 189 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 FCARP24071 287 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 GALNSP34059 522 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 P2RY1P47900 373 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 RBP2P50120 134 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 NDUFA6P56556 154 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 HSD17B7P56937 341 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 CD81P60033 236 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 GPM6BQ13491 265 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 DNLZQ5SXM8 178 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 LILRB2Q8N423 598 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 SUMF2Q8NBJ7 301 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 GNRHR2Q96P88 292 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 ADOQ96SZ5 270 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 ST6GALNAC5Q9BVH7 336 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 NXF5Q9H1B4 397 aaKnown RBP13.64□□□□□ -0.23
SMG6-207ENST00000570756 NSG2Q9Y328 171 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 FBXO7Q9Y3I1 522 aa13.64□□□□□ -0.23
SMG6-207ENST00000570756 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 SDCBPO00560 298 aaPredicted RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 RAD51DO75771 328 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 OR13C7P0DN81 318 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 HIST1H1BP16401 226 aaKnown RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 POLR2HP52434 150 aaKnown RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 SNU13P55769 128 aaKnown RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 SGPP2Q8IWX5 399 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 TDHQ8IZJ6 230 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 CPNE4Q96A23 557 aaPredicted RBP13.63□□□□□ -0.23
SMG6-207ENST00000570756 S100PBPQ96BU1 408 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 ARHGAP5-AS1Q96IT6 56 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 FAM60AQ9NP50 221 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 SLC2A4RGQ9NR83 387 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 DOK5Q9P104 306 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 CPAMD8Q8IZJ3 1885 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 AHSA1O95433 338 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 CTSBP07858 339 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 PTGER4P35408 488 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 TMEM50BP56557 158 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 FOXK1P85037 733 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 RUNX3Q13761 415 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 TMEM151BQ8IW70 566 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 LRRC18Q8N456 261 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 ZNF610Q8N9Z0 462 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 ERGIC1Q969X5 290 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 C14orf144Q96I85 54 aa13.63□□□□□ -0.23
SMG6-207ENST00000570756 PUS1Q9Y606 427 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMG6-207ENST00000570756 TMED7-TICAM2A0A0A6YYA0 188 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 SOX1O00570 391 aaPredicted RBP13.62□□□□□ -0.23
SMG6-207ENST00000570756 NPIPB7O75200 414 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 F10P00742 488 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 POU2F2P09086 479 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 BCKDHBP21953 392 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 ZNF84P51523 738 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 CHRFAM7AQ494W8 412 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 ARMC6Q6NXE6 501 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 ZNF574Q6ZN55 896 aaPredicted RBP13.62□□□□□ -0.23
SMG6-207ENST00000570756 GALNTL5Q7Z4T8 443 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 RNASE11Q8TAA1 199 aaKnown RBP13.62□□□□□ -0.23
SMG6-207ENST00000570756 MR1Q95460 341 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 FAM131CQ96AQ9 280 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 MUCL1Q96DR8 90 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 SLC46A1Q96NT5 459 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 BANF2Q9H503 90 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 TMEM131Q92545 1883 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 FRG2CA6NGY1 282 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 H0Y8X5 98 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 CRTAPO75718 401 aaPredicted RBP13.62□□□□□ -0.23
SMG6-207ENST00000570756 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 RGS19P49795 217 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 PPP1CAP62136 330 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 PRTGQ2VWP7 1150 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 GPR157Q5UAW9 335 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 SULF2Q8IWU5 870 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 MFSD8Q8NHS3 518 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 SPPL3Q8TCT6 385 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 SLAMF6Q96DU3 332 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 GALNT14Q96FL9 552 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
SMG6-207ENST00000570756 PRDM13Q9H4Q3 707 aa13.62□□□□□ -0.23
SMG6-207ENST00000570756 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.61□□□□□ -0.23
SMG6-207ENST00000570756 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.61□□□□□ -0.23
SMG6-207ENST00000570756 NPIPA5E9PKD4 350 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 TNFRSF10CO14798 259 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 IFNA10P01566 189 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 IL12BP29460 328 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 SLC37A1P57057 533 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 FMODQ06828 376 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 TDGQ13569 410 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 ZNF674Q2M3X9 581 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 GGNBP1Q5YKI7 109 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 LCN10Q6JVE6 187 aa13.61□□□□□ -0.23
SMG6-207ENST00000570756 TTLL10Q6ZVT0 673 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms