RNA–Protein interactions for RNA: ENST00000570510.6

VPS53-207, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 4

Gene VPS53, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-207ENST00000570510 DUS3LQ96G46 650 aaKnown RBP9.01□□□□□ -0.97
VPS53-207ENST00000570510 CCL13Q99616 98 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 ADAT1Q9BUB4 502 aaKnown RBP9.01□□□□□ -0.97
VPS53-207ENST00000570510 OR52D1Q9H346 318 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 METTL8Q9H825 291 aaKnown RBP9.01□□□□□ -0.97
VPS53-207ENST00000570510 SERTAD4Q9NUC0 356 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 KAAG1Q9UBP8 84 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 POMPQ9Y244 141 aa9.01□□□□□ -0.97
VPS53-207ENST00000570510 BIRC6Q9NR09 4857 aa9□□□□□ -0.97
VPS53-207ENST00000570510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9□□□□□ -0.97
VPS53-207ENST00000570510 TCRBV4S1A1TA0A5B7 111 aa9□□□□□ -0.97
VPS53-207ENST00000570510 ADARB2-AS1A8MUL3 147 aa9□□□□□ -0.97
VPS53-207ENST00000570510 H0YAE9 185 aa9□□□□□ -0.97
VPS53-207ENST00000570510 RER1O15258 196 aa9□□□□□ -0.97
VPS53-207ENST00000570510 GLCEO94923 617 aa9□□□□□ -0.97
VPS53-207ENST00000570510 ZFPL1O95159 310 aa9□□□□□ -0.97
VPS53-207ENST00000570510 RENP00797 406 aa9□□□□□ -0.97
VPS53-207ENST00000570510 CST1P01037 141 aa9□□□□□ -0.97
VPS53-207ENST00000570510 CHRM2P08172 466 aa9□□□□□ -0.97
VPS53-207ENST00000570510 FCGR1AP12314 374 aa9□□□□□ -0.97
VPS53-207ENST00000570510 ANXA8P13928 327 aa9□□□□□ -0.97
VPS53-207ENST00000570510 VDAC2P45880 294 aaPredicted RBP9□□□□□ -0.97
VPS53-207ENST00000570510 FXYD6P3P58550 94 aa9□□□□□ -0.97
VPS53-207ENST00000570510 EGFEM1PQ0D2K5 195 aa9□□□□□ -0.97
VPS53-207ENST00000570510 AANATQ16613 207 aa9□□□□□ -0.97
VPS53-207ENST00000570510 MESTQ5EB52 335 aa9□□□□□ -0.97
VPS53-207ENST00000570510 MRPL21Q7Z2W9 205 aaKnown RBP9□□□□□ -0.97
VPS53-207ENST00000570510 ZBTB46Q86UZ6 589 aa9□□□□□ -0.97
VPS53-207ENST00000570510 LNX2Q8N448 690 aa9□□□□□ -0.97
VPS53-207ENST00000570510 OR5AU1Q8NGC0 362 aa9□□□□□ -0.97
VPS53-207ENST00000570510 Q96M85 177 aa9□□□□□ -0.97
VPS53-207ENST00000570510 ZNF702PQ9H963 129 aa9□□□□□ -0.97
VPS53-207ENST00000570510 ABCB10Q9NRK6 738 aa9□□□□□ -0.97
VPS53-207ENST00000570510 DNAJB9Q9UBS3 223 aa9□□□□□ -0.97
VPS53-207ENST00000570510 SAMHD1Q9Y3Z3 626 aaKnown RBP9□□□□□ -0.97
VPS53-207ENST00000570510 EPPK1P58107 5090 aaKnown RBP9□□□□□ -0.97
VPS53-207ENST00000570510 TENM2Q9NT68 2774 aa9□□□□□ -0.97
VPS53-207ENST00000570510 F2RL2O00254 374 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 CHST1O43916 411 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 DIRAS1O95057 198 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 LCATP04180 440 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 LYL1P12980 280 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 MUC1P15941 1255 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 NOS3P29474 1203 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 GRK5P34947 590 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 GK2Q14410 553 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 CNN3Q15417 329 aaKnown RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 CCDC92Q53HC0 331 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 ZNF826PQ6ZT77 177 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 CCDC121Q6ZUS5 278 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 CENPVQ7Z7K6 275 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 FGFRL1Q8N441 504 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 FAM216BQ8N7L0 139 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 Q8N7P7 452 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 Q8NFD4 153 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 GJC3Q8NFK1 279 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 OR2T33Q8NG76 320 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 OR5D13Q8NGL4 314 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 GIPC3Q8TF64 312 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 CANT1Q8WVQ1 401 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 C17orf50Q8WW18 174 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 ITFG2Q969R8 447 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 CCDC124Q96CT7 223 aaKnown RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 ERMAPQ96PL5 475 aaPredicted RBP8.99□□□□□ -0.97
VPS53-207ENST00000570510 TEX12Q9BXU0 123 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 HDHD2Q9H0R4 259 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 MEGF9Q9H1U4 602 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 ZNF556Q9HAH1 456 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 ARMC1Q9NVT9 282 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 C14orf119Q9NWQ9 140 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 ENOPH1Q9UHY7 261 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 ADAM18Q9Y3Q7 739 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 IER3IP1Q9Y5U9 82 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 V9GYQ6 96 aa8.99□□□□□ -0.97
VPS53-207ENST00000570510 LCE6AA0A183 80 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 A0A1B0GWJ7 208 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 GGT3PA6NGU5 568 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 F5H5K5 113 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 H3BUI4 141 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 M0R1W7 72 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 BHLHE40O14503 412 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 IFNGP01579 166 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 CCDC159P0C7I6 412 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 GGT2P36268 569 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 SLC25A1P53007 311 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 WDR38Q5JTN6 314 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 OTPQ5XKR4 325 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 GCSAMQ8N6F7 178 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 OR9Q1Q8NGQ5 310 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 OR8S1Q8NH09 359 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 COQ7Q99807 217 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 MCRIP2Q9BUT9 160 aaKnown RBP8.98□□□□□ -0.97
VPS53-207ENST00000570510 IFT27Q9BW83 186 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 CDCA4Q9BXL8 241 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 CADM1Q9BY67 442 aaKnown RBP8.98□□□□□ -0.97
VPS53-207ENST00000570510 SYT4Q9H2B2 425 aa8.98□□□□□ -0.97
VPS53-207ENST00000570510 GAR1Q9NY12 217 aaKnown RBP8.98□□□□□ -0.97
VPS53-207ENST00000570510 PITPNC1Q9UKF7 332 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms