RNA–Protein interactions for RNA: ENST00000569945.1

GCOM1-213, Transcript of GRINL1A complex locus 1, humanhuman

Gene GCOM1, Length 2,335 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-213ENST00000569945 NPSP0C0P6 89 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 LINC00614P0C842 121 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 AKR1C4P17516 323 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 MRPS11P82912 194 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 DUSP8Q13202 625 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 IL15RAQ13261 267 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 RSPO4Q2I0M5 234 aaPredicted RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 GGNBP1Q5YKI7 109 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 OR2T2Q6IF00 324 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF343Q6P1L6 599 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 NPEPL1Q8NDH3 523 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 OR9K2Q8NGE7 335 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 RNF128Q8TEB7 428 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ACTR3CQ9C0K3 210 aaPredicted RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 EIF5A2Q9GZV4 153 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 OCIAD1Q9NX40 245 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 SEMA5BQ9P283 1151 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 MRPS18CQ9Y3D5 142 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ADAMTS20P59510 1910 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF727A8MUV8 499 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 C4orf51C9J302 202 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 H0YGG7 62 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 SOX15O60248 233 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF354AO60765 605 aaPredicted RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 TRGC2P03986 189 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 GAPDHP04406 335 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 C8orf89P0DMQ9 161 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 MSX1P28360 303 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 APLNRP35414 380 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 TSFMP43897 325 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 NOVA1P51513 510 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 TDGF1P3P51864 188 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ERVFRD-1P60508 538 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ARF3P61204 181 aaPredicted RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 FAM3AP98173 230 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZFP36L1Q07352 338 aaKnown RBP12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 MOGAT2Q3SYC2 334 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 EIPR1Q53HC9 387 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 LINC01590Q5TEZ4 76 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF627Q7L945 461 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 DCXRQ7Z4W1 244 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 SLC16A11Q8NCK7 471 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 SEMA6DQ8NFY4 1073 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ZPLD1Q8TCW7 415 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 LAMP5Q9UJQ1 280 aa12.48□□□□□ -0.41
GCOM1-213ENST00000569945 ASPMQ8IZT6 3477 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 DCDC2BA2VCK2 349 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 RAB27BO00194 218 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF432O94892 652 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 AIFM1O95831 613 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 TRGC1P0CF51 173 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 GNG10P50151 68 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 NPY4RP50391 375 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 AKR1C8PQ5T2L2 129 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 ASPHD2Q6ICH7 369 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 RNF44Q7L0R7 432 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 MFSD9Q8NBP5 474 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 BSCL2Q96G97 398 aaPredicted RBP12.47□□□□□ -0.41
GCOM1-213ENST00000569945 ZFYVE21Q9BQ24 234 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
GCOM1-213ENST00000569945 RAB18Q9NP72 206 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 MRPS2Q9Y399 296 aaKnown RBP12.47□□□□□ -0.41
GCOM1-213ENST00000569945 WDR45Q9Y484 360 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 SCN3AQ9NY46 2000 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 PIEZO1Q92508 2521 aa12.47□□□□□ -0.41
GCOM1-213ENST00000569945 A0A087WWC5 75 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 A0A1W2PNU3 283 aaPredicted RBP12.46□□□□□ -0.41
GCOM1-213ENST00000569945 A0A1W2PR48 441 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 SYNDIG1LA6NDD5 238 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 NME2P1O60361 137 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 TACSTD2P09758 323 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 CCL4P13236 92 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 RAB32Q13637 225 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 CDCP2Q5VXM1 449 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 ZNF584Q8IVC4 421 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 D2HGDHQ8N465 521 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 HSD17B11Q8NBQ5 300 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 OR6K6Q8NGW6 343 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 FRZBQ92765 325 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 LMF1Q96S06 567 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 ZMAT3Q9HA38 289 aaKnown RBP12.46□□□□□ -0.41
GCOM1-213ENST00000569945 CES1P1Q9UKY3 287 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 IER3IP1Q9Y5U9 82 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 ATXN8OSP0DMR3 200 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 PMPCAQ10713 525 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 CLN3Q13286 438 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 COTL1Q14019 142 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 ZNHIT3Q15649 155 aaPredicted RBP12.46□□□□□ -0.41
GCOM1-213ENST00000569945 DCAF10Q5QP82 559 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 HES3Q5TGS1 186 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 ADAMTS15Q8TE58 950 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 NMNAT3Q96T66 252 aa12.46□□□□□ -0.41
GCOM1-213ENST00000569945 NKX3-1Q99801 234 aaPredicted RBP12.46□□□□□ -0.41
GCOM1-213ENST00000569945 PUS1Q9Y606 427 aaKnown RBP eCLIP12.46□□□□□ -0.41
GCOM1-213ENST00000569945 TGIF2-C20orf24A0A0A6YYL0 155 aa12.45□□□□□ -0.42
GCOM1-213ENST00000569945 A0A1B0GW64 132 aa12.45□□□□□ -0.42
GCOM1-213ENST00000569945 WIPF3A6NGB9 483 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms