RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TNFRSF13BO14836 293 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 OR2T7P0C7T2 308 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 ATP6V1B1P15313 513 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 MAP2K3P46734 347 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 SCGB2A2Q13296 93 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 TMED1Q13445 227 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 KCNJ8Q15842 424 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 TEX36Q5VZQ5 186 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 WDR25Q64LD2 544 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 FAM90A1Q86YD7 464 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 ZDHHC23Q8IYP9 409 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 OR2T27Q8NH04 317 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 SPATA3Q8NHX4 192 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 NANPQ8TBE9 248 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 LRRC29Q8WV35 223 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 PIGCQ92535 297 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 FAM71F1Q96KD3 344 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 MICU1Q9BPX6 476 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 C9orf16Q9BUW7 83 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 TRIM36Q9NQ86 728 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 IMPAD1Q9NX62 359 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
CNOT1-220ENST00000569916 CLN8Q9UBY8 286 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 AUP1Q9Y679 476 aa10.86□□□□□ -0.67
CNOT1-220ENST00000569916 TRAV38-1A0A0B4J264 116 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 TMEM210A6NLX4 147 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 CDIPTO14735 213 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 DHRS3O75911 302 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 KRT8P05787 483 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 CFHR2P36980 270 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 SNRPGP62308 76 aaKnown RBP10.85□□□□□ -0.67
CNOT1-220ENST00000569916 PAX8Q06710 450 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 SLC25A30Q5SVS4 291 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF684Q5T5D7 378 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 BCL2L15Q5TBC7 163 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 LIPNQ5VXI9 398 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 COMMD2Q86X83 199 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 ELMOD2Q8IZ81 293 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 SEMA6DQ8NFY4 1073 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 TRUB1Q8WWH5 349 aaKnown RBP10.85□□□□□ -0.67
CNOT1-220ENST00000569916 RFKQ969G6 155 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 ITFG2Q969R8 447 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 SLC29A1Q99808 456 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 MRI1Q9BV20 369 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 OCEL1Q9H607 264 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 SMURF1Q9HCE7 757 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 OR52A1Q9UKL2 312 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 GTF2A1LQ9UNN4 478 aa10.85□□□□□ -0.67
CNOT1-220ENST00000569916 IGHV3OR15-7A0A075B7D8 119 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 A0A1B0GTI1 187 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 SRRM5B3KS81 715 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 C22orf46C9J442 243 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 ADAM20O43506 726 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 NDUFA2O43678 99 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 ENTPD6O75354 484 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 FCN3O75636 299 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 GYPAP02724 150 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 FAHP16930 419 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 NPY4RP50391 375 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 ZNF85Q03923 595 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 OCLNQ16625 522 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 ARMCX4Q5H9R4 360 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 FAM76BQ5HYJ3 339 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 KLF17Q5JT82 389 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-220ENST00000569916 CEP78Q5JTW2 689 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 ZBTB37Q5TC79 503 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 YIPF7Q8N8F6 280 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 SCCPDHQ8NBX0 429 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 OR10H4Q8NGA5 316 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 RPL3LQ92901 407 aaKnown RBP10.84□□□□□ -0.67
CNOT1-220ENST00000569916 RNF170Q96K19 258 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 TECTBQ96PL2 329 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 C19orf24Q9BVV8 132 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 KAAG1Q9UBP8 84 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.84□□□□□ -0.67
CNOT1-220ENST00000569916 SLC22A13Q9Y226 551 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 PIGLQ9Y2B2 252 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 SNX5Q9Y5X3 404 aa10.84□□□□□ -0.67
CNOT1-220ENST00000569916 A0A0A6YYJ9 748 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 KIR2DS1A0A191URI9 304 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 METTL15A6NJ78 407 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 P2RY10O00398 339 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 MTRF1O75570 445 aaKnown RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 SULT1C4O75897 302 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 RGS9O75916 674 aaPredicted RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 RPP14O95059 124 aaKnown RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 VENTXO95231 258 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 MUC1P15941 1255 aaPredicted RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 GABRB1P18505 474 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 ATP6V1E1P36543 226 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 MTNR1AP48039 350 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 GPM6AP51674 278 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 ISL1P61371 349 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 ELF3P78545 371 aaPredicted RBP10.83□□□□□ -0.68
CNOT1-220ENST00000569916 RIPPLY1Q0D2K3 151 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 CEACAM21Q3KPI0 293 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 DMRTC1Q5HYR2 192 aa10.83□□□□□ -0.68
CNOT1-220ENST00000569916 MEDAGQ5VYS4 303 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms