RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 MED20Q9H944 212 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 EFCAB1Q9HAE3 211 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF281Q9Y2X9 895 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 CDH10Q9Y6N8 788 aa9.83□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF850A8MQ14 1090 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 SLC22A2O15244 555 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 GPR37O15354 613 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 IDH3BO43837 385 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 CD28P10747 220 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 SPI1P17947 270 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 ACKR3P25106 362 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 HSD11B1P28845 292 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 BMXP51813 675 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 MXRA7P84157 204 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 MZT1Q08AG7 82 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 ZNF788Q6ZQV5 615 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 ERI1Q8IV48 349 aaKnown RBP9.82□□□□□ -0.84
CAPN3-220ENST00000569827 GALNT4Q8N4A0 578 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 BEND2Q8NDZ0 799 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 TMEM185AQ8NFB2 350 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 OR52L1Q8NGH7 329 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 OR4C15Q8NGM1 316 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 OR4C13Q8NGP0 309 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 OR6N2Q8NGY6 317 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 ANGPTL6Q8NI99 470 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 C8orf46Q8TAG6 207 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 NPRL2Q8WTW4 380 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 PYURFQ96I23 114 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 CLPTM1LQ96KA5 538 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 RAB3IPQ96QF0 476 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-220ENST00000569827 MMP28Q9H239 520 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 TBC1D23Q9NUY8 699 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 ARMC1Q9NVT9 282 aa9.82□□□□□ -0.84
CAPN3-220ENST00000569827 AURKAIP1Q9NWT8 199 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-220ENST00000569827 MEX3AA1L020 520 aaKnown RBP9.81□□□□□ -0.84
CAPN3-220ENST00000569827 FAM183AA6NL82 134 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 H0YAE9 185 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 RHBDL1O75783 438 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 FABP3P05413 133 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 COX7A1P24310 79 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 FMO3P31513 532 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 GNALP38405 381 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 NAA10P41227 235 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-220ENST00000569827 UBE2E1P51965 193 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 PRDX4Q13162 271 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 LRRC75BQ2VPJ9 315 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 CRIP3Q6Q6R5 217 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 HACD2Q6Y1H2 254 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 PRSS45Q7RTY3 260 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 MKXQ8IYA7 352 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 BATF2Q8N1L9 274 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 ZNRF1Q8ND25 227 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 OR2T6Q8NHC8 308 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 HPSE2Q8WWQ2 592 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 CFHR4Q92496 578 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 PIGCQ92535 297 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 SGCDQ92629 289 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 OR5M11Q96RB7 305 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 MICU1Q9BPX6 476 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 TSSK6Q9BXA6 273 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 TLNRD1Q9H1K6 362 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 OPA3Q9H6K4 179 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 SPAG4Q9NPE6 437 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 C19orf12Q9NSK7 152 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 MAB21L2Q9Y586 359 aa9.81□□□□□ -0.84
CAPN3-220ENST00000569827 IGKV1D-17A0A075B6S4 117 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 M0R1W7 72 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 ARPC2O15144 300 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 DDOSTP39656 456 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 KIR2DS4P43632 304 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 CEBPDP49716 269 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-220ENST00000569827 RAB13P51153 203 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 CAPZA1P52907 286 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 SMIM11AP58511 58 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 GRB2P62993 217 aaKnown RBP9.8□□□□□ -0.84
CAPN3-220ENST00000569827 C11orf91Q3C1V1 193 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 TMEM95Q3KNT9 176 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 ATPAF1Q5TC12 328 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-220ENST00000569827 LINC01590Q5TEZ4 76 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 NCR3LG1Q68D85 454 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 IQCF1Q8N6M8 205 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 OTULINQ96BN8 352 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 C12orf43Q96C57 262 aaKnown RBP9.8□□□□□ -0.84
CAPN3-220ENST00000569827 PGAM5Q96HS1 289 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 LYZL4Q96KX0 146 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 RTL8AQ9BWD3 113 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 NMNAT2Q9BZQ4 307 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 METTL8Q9H825 291 aaKnown RBP9.8□□□□□ -0.84
CAPN3-220ENST00000569827 SP140LQ9H930 580 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 VIPAS39Q9H9C1 493 aa9.8□□□□□ -0.84
CAPN3-220ENST00000569827 ANXA2P2A6NMY6 339 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 OR2AT4A6NND4 320 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 SIGLEC5O15389 551 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 FBXO24O75426 580 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 GMNNO75496 209 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 TIPRLO75663 272 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 GASTP01350 101 aa9.79□□□□□ -0.84
CAPN3-220ENST00000569827 ACAA1P09110 424 aaPredicted RBP9.79□□□□□ -0.84
CAPN3-220ENST00000569827 H2AFXP16104 143 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms