RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 GSG1LQ6UXU4 331 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 BATF2Q8N1L9 274 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 MARCH1Q8TCQ1 289 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 ELP5Q8TE02 316 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 CLUHP3Q96NS8 147 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 SLC35D1Q9NTN3 355 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 PLEK2Q9NYT0 353 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 RNF24Q9Y225 148 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 HS3ST3B1Q9Y662 390 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 FAM186AA6NE01 2351 aa7.72□□□□□ -1.17
LINC00558-201ENST00000569422 A0A0U1RQV5 110 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 A0A1W2PNV4 684 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 C5orf51A6NDU8 294 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 PMS2P2O95744 297 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 IGHV3-9P01782 118 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 RFC3P40938 356 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 CAPZA1P52907 286 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 C1QL2Q7Z5L3 287 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 RPS19BP1Q86WX3 136 aaKnown RBP7.71□□□□□ -1.17
LINC00558-201ENST00000569422 OR10R2Q8NGX6 335 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 OR6X1Q8NH79 312 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 RAB3CQ96E17 227 aa7.71□□□□□ -1.17
LINC00558-201ENST00000569422 SLC25A21Q9BQT8 299 aaPredicted RBP7.71□□□□□ -1.17
LINC00558-201ENST00000569422 UTP23Q9BRU9 249 aaKnown RBP7.71□□□□□ -1.17
LINC00558-201ENST00000569422 IGHV1-45A0A0A0MS14 117 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 A0A0A6YYD4 124 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 AQP7P3A6NL99 342 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR2AT4A6NND4 320 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 D6RAR5 112 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 UBE2CO00762 179 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SIGLEC5O15389 551 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 LAMTOR5O43504 91 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SSR4P51571 173 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SLC35A1P78382 337 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SIGLEC14Q08ET2 396 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SLC25A47Q6Q0C1 308 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 DTX1Q86Y01 620 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 FAM169BQ8N8A8 192 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR51T1Q8NGJ9 327 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR4K15Q8NH41 348 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR2AE1Q8NHA4 323 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 AQP3Q92482 292 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 ARHGAP5-AS1Q96IT6 56 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 TMEM59Q9BXS4 323 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 COMMD9Q9P000 198 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 B3GALT1Q9Y5Z6 326 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 A0A0G2JMM0 328 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 A0A1W2PPB8 328 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 A0A1W2PRS3 328 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR5H14A6NHG9 310 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 KIR3DP1A8MWS1 328 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SULT1C2O00338 296 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 KLF7O75840 302 aaPredicted RBP7.71□□□□□ -1.18
LINC00558-201ENST00000569422 STAG3L3P0CL85 134 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 ATP1B3P54709 279 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 SLC9A3R2Q15599 337 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 LY6G6FQ5SQ64 297 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OPN5Q6U736 354 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 OR14L1PQ8NHC6 308 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 ROBO4Q8WZ75 1007 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 CEP192Q8TEP8 1941 aa7.71□□□□□ -1.18
LINC00558-201ENST00000569422 RLN2P04090 185 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 RNF224P0DH78 156 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 COX6A1P12074 109 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF17P17021 662 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 EIF1P41567 113 aaKnown RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 MECP2P51608 486 aaKnown RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 PLAC9Q5JTB6 97 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 NKAPLQ5M9Q1 402 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 OR5AS1Q8N127 324 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 PPP1R1CQ8WVI7 109 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 GTF3AQ92664 365 aaKnown RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 DMRTA2Q96SC8 542 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 S100A13Q99584 98 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ULBP2Q9BZM5 246 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 LPAR5Q9H1C0 372 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 HDGFL3Q9Y3E1 203 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 RHBDD3Q9Y3P4 386 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 KNTC1P50748 2209 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 TRAV14DV4A0A0A6YYC5 116 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 IGKV1-9A0A0C4DH69 117 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 A0A0J9YW62 118 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 TTLL8A6PVC2 850 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 RAD51DO75771 328 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF205O95201 554 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 RRASP10301 218 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 FCGR2AP12318 317 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 GABRR1P24046 479 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 SPCS3P61009 180 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 SLC25A53Q5H9E4 307 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 NHLRC3Q5JS37 347 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 LYPD6Q86Y78 171 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 RBPMSQ93062 196 aaKnown RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ALKBH3Q96Q83 286 aaPredicted RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 PRRT1Q99946 306 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF471Q9BX82 626 aaPredicted RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 PNRC2Q9NPJ4 139 aaKnown RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 DECR2Q9NUI1 292 aa7.7□□□□□ -1.18
LINC00558-201ENST00000569422 ZNF701Q9NV72 531 aaPredicted RBP7.7□□□□□ -1.18
LINC00558-201ENST00000569422 PIGLQ9Y2B2 252 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms