RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 FPR2P25090 351 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 POLR2IP36954 125 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 IL5RAQ01344 420 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 POU4F2Q12837 409 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 PRDX4Q13162 271 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 AWAT1Q58HT5 328 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 LCN1P1Q5VSP4 162 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 C1orf146Q5VVC0 180 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 NXNL2Q5VZ03 156 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 RUSC1-AS1Q66K80 236 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 C12orf54Q6X4T0 127 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ASRGL1Q7L266 308 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 SSX6Q7RTT6 188 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 AMIGO2Q86SJ2 522 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ZNF679Q8IYX0 411 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 FAM216BQ8N7L0 139 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 BOLLQ8N9W6 283 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 TMEM163Q8TC26 289 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 LRTOMTQ8WZ04 291 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 C12orf43Q96C57 262 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 DUX5Q96PT3 197 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 CNN2Q99439 309 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 CIB1Q99828 191 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 GABARAPL3Q9BY60 117 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 SIRPDQ9H106 197 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 WDR13Q9H1Z4 485 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ABCB9Q9NP78 766 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 HAO2Q9NYQ3 351 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ERVK-18Q9QC07 812 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 NUFIP1Q9UHK0 495 aaKnown RBP6.47□□□□□ -1.37
CDH3-209ENST00000569080 OAZ3Q9UMX2 235 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 AP4S1Q9Y587 144 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 MGAM2Q2M2H8 2515 aa6.47□□□□□ -1.37
CDH3-209ENST00000569080 ZNF816-ZNF321PA0A0X1KG74 233 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TMEM269A0A1B0GVZ9 245 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ACOD1A6NK06 481 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 SLC22A31A6NKX4 558 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TMEM210A6NLX4 147 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ANXA2P2A6NMY6 339 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZNF879B4DU55 563 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 E9PQ18 207 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 G3V2T6 193 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 HAX1O00165 279 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 DVL1O14640 695 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TMPRSS2O15393 492 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZNF254O75437 659 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RHBDL1O75783 438 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ATP5HO75947 161 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TTRP02766 147 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TFF1P04155 84 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 HKR1P10072 659 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 FCGR1AP12314 374 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 FASP25445 335 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 GNALP38405 381 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RASSF2P50749 326 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 SLC9A3R2Q15599 337 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 SNCBQ16143 134 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MICBQ29980 383 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 C11orf91Q3C1V1 193 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ATPAF1Q5TC12 328 aaPredicted RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 TMEM42Q69YG0 159 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 KCTD18Q6PI47 426 aaPredicted RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 BRD3OSQ6XYD6 125 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 Q6ZSR3 168 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MEPCEQ7L2J0 689 aaKnown RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 KRT77Q7Z794 578 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZDHHC13Q8IUH4 622 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZDHHC23Q8IYP9 409 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 FTMTQ8N4E7 242 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TCEANCQ8N8B7 351 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 SCCPDHQ8NBX0 429 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 LY6G5BQ8NDX9 201 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 OR10Z1Q8NGY1 313 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 OR51E1Q8TCB6 317 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ASB17Q8WXJ9 295 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RPL3LQ92901 407 aaKnown RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 PPP1R14AQ96A00 147 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 WDFY2Q96P53 400 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RAB3IPQ96QF0 476 aaPredicted RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 CCL13Q99616 98 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MICU1Q9BPX6 476 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RTL8AQ9BWD3 113 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TEX12Q9BXU0 123 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MROQ9BYG7 248 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 PRRG3Q9BZD7 231 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MS4A7Q9GZW8 240 aaPredicted RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 PBOV1Q9GZY1 135 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 RASSF4Q9H2L5 321 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 OR51I2Q9H344 312 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZMAT3Q9HA38 289 aaKnown RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 GPR84Q9NQS5 396 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 CLN6Q9NWW5 311 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 MRM2Q9UI43 246 aaKnown RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 RPUSD1Q9UJJ7 312 aaKnown RBP6.46□□□□□ -1.38
CDH3-209ENST00000569080 ZNF222Q9UK12 451 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 TMEM14AQ9Y6G1 99 aa6.46□□□□□ -1.38
CDH3-209ENST00000569080 VWFP04275 2813 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 CENPVL3A0A0U1RRI6 287 aa6.45□□□□□ -1.38
CDH3-209ENST00000569080 A0A1B0GTI1 187 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms