RNA–Protein interactions for RNA: ENST00000567947.1

CBFB-208, Transcript of core-binding factor subunit beta, human

TSL 3

Gene CBFB, Length 610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBFB-208	ENST00000567947	PITPNC1	Q9UKF7	332 aa		4.25	□□□□□ -1.73
CBFB-208	ENST00000567947	MMP24	Q9Y5R2	645 aa		4.25	□□□□□ -1.73
CBFB-208	ENST00000567947	PIKFYVE	Q9Y2I7	2098 aa		4.25	□□□□□ -1.73
CBFB-208	ENST00000567947		A0A087WYN8	130 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947		A0A0A6YYH2	397 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947		A0A0B4J2A0	478 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947		A0A0U1RQV5	110 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	MED19	A0JLT2	244 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SMCO3	A2RU48	225 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ANTXRL	A6NF34	631 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947		A6NJ64	397 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR2AT4	A6NND4	320 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	NCF1C	A8MVU1	366 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM157A	C9JC47	383 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	PPP5D1	E7EU14	171 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM72C	H0Y354	149 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947		H3BN98	237 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TLX2	O43763	284 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR1I1	O60431	355 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TBX19	O60806	448 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	GCM2	O75603	506 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	DFFB	O76075	338 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	DIRAS1	O95057	198 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	GUCA1C	O95843	209 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	GAPDH	P04406	335 aa	Known RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	C8G	P07360	202 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CTSL	P07711	333 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CD3G	P09693	182 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ALPI	P09923	528 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ANKRD34C	P0C6C1	535 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SFTA3	P0C7M3	94 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM157C	P0CG43	387 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR5H8	P0DN80	308 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	AMD1	P17707	334 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CPT2	P23786	658 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ELAVL4	P26378	380 aa	Known RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	AKT2	P31751	481 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	BMI1	P35226	326 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ATP6V1E1	P36543	226 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	RAD52	P43351	418 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CX3CR1	P49238	355 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	COMP	P49747	757 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	GNG10	P50151	68 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	BLK	P51451	505 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	LUM	P51884	338 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	H2BFS	P57053	126 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ACTB	P60709	375 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	LSM6	P62312	80 aa	Known RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ACTG1	P63261	375 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CDK6	Q00534	326 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	MC1R	Q01726	317 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	AIMP2	Q13155	320 aa	Known RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OLIG2	Q13516	323 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SCARB2	Q14108	478 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	KIAA0141	Q14154	515 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	USF2	Q15853	346 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ISX	Q2M1V0	245 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	HLA-B	Q31612	363 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	C14orf28	Q4W4Y0	310 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM72A	Q5TYM5	149 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZDHHC20	Q5W0Z9	365 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FBXW9	Q5XUX1	488 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM72D	Q6L9T8	149 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	REEP3	Q6NUK4	255 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	NOXRED1	Q6NXP6	359 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZCCHC12	Q6PEW1	402 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZNF613	Q6PF04	617 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ULK3	Q6PHR2	472 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SPSB3	Q6PJ21	355 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	APOOL	Q6UXV4	268 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZNF621	Q6ZSS3	439 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	DPPA4	Q7L190	304 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SSX6	Q7RTT6	188 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ADCK2	Q7Z695	626 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	C17orf82	Q86X59	251 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	FAM72B	Q86X60	149 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZNF573	Q86YE8	665 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CDK20	Q8IZL9	346 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZFP82	Q8N141	532 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	HIST3H2BB	Q8N257	126 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	SYS1	Q8N2H4	156 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	RYBP	Q8N488	228 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR2L3	Q8NG85	312 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR52B6	Q8NGF0	335 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR6T1	Q8NGN1	323 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR4A4P	Q8NGN8	299 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR10R2	Q8NGX6	335 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR4C6	Q8NH72	309 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TNFAIP8L1	Q8WVP5	186 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	EXT2	Q93063	718 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TMEM159	Q96B96	161 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	HAVCR1	Q96D42	359 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	YPEL4	Q96NS1	127 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	PKP4	Q99569	1192 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TMEM208	Q9BTX3	173 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	ZNF471	Q9BX82	626 aa	Predicted RBP	4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	CHIA	Q9BZP6	476 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR2AG1	Q9H205	316 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	OR10A4	Q9H209	315 aa		4.24	□□□□□ -1.73
CBFB-208	ENST00000567947	TMEM185B	Q9H7F4	350 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms