RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 THEM6Q8WUY1 208 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 H1FXQ92522 213 aaKnown RBP12.56□□□□□ -0.4
CDR2-206ENST00000567406 PIGCQ92535 297 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 DYRK2Q92630 601 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 ITPKCQ96DU7 683 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 CLPTM1LQ96KA5 538 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 MAGIXQ9H6Y5 334 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 ZNF391Q9UJN7 358 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 KLHDC2Q9Y2U9 406 aa12.56□□□□□ -0.4
CDR2-206ENST00000567406 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 NDUFB3O43676 98 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 GLCEO94923 617 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 NAA10P41227 235 aaPredicted RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 PRDX4Q13162 271 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 TRIM25Q14258 630 aaKnown RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 TAF9Q16594 264 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 STUMQ69YW2 141 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 ASPHD2Q6ICH7 369 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 LCN8Q6JVE9 175 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 SLC36A1Q7Z2H8 476 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 HS3ST5Q8IZT8 346 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 BBS1Q8NFJ9 593 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 BCAS4Q8TDM0 211 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 GIPC3Q8TF64 312 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 CCDC124Q96CT7 223 aaKnown RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 NSL1Q96IY1 281 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 MICU1Q9BPX6 476 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 ELL3Q9HB65 397 aaPredicted RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 HAO2Q9NYQ3 351 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 PRPF19Q9UMS4 504 aaKnown RBP12.55□□□□□ -0.4
CDR2-206ENST00000567406 FAM96BQ9Y3D0 163 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 KPTNQ9Y664 436 aa12.55□□□□□ -0.4
CDR2-206ENST00000567406 A0A1B0GVI7 797 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 TGM4P49221 684 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 BLVRAP53004 296 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 GINS1Q14691 196 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 DGUOKQ16854 277 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 HIST2H2BDQ6DRA6 164 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 Q6ZSV7 163 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 SHFQ7M4L6 423 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 LDLRAD3Q86YD5 345 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 GALNT4Q8N4A0 578 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 HPSE2Q8WWQ2 592 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 OR5P3Q8WZ94 311 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 RNF170Q96K19 258 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 GAFA1Q96PS6 74 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 PKP2Q99959 881 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 DCTN5Q9BTE1 182 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 CHID1Q9BWS9 393 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 TLNRD1Q9H1K6 362 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 SP140LQ9H930 580 aa12.54□□□□□ -0.4
CDR2-206ENST00000567406 ANXA2P2A6NMY6 339 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 PRR23D1E9PI22 279 aaPredicted RBP12.53□□□□□ -0.4
CDR2-206ENST00000567406 PSMD9O00233 223 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 TIPRLO75663 272 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 RHBDL1O75783 438 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 CST1P01037 141 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 LYNP07948 512 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 PRR23D2P0DMB1 279 aaPredicted RBP12.53□□□□□ -0.4
CDR2-206ENST00000567406 T-ENOLP0DO92 83 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 PRKACGP22612 351 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 PROK1P58294 105 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 IL5RAQ01344 420 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 LRRC10Q5BKY1 277 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 TMEM236Q5W0B7 351 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 CD300LDQ6UXZ3 194 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 CPOQ8IVL8 374 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 OR8B12Q8NGG6 310 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 C17orf50Q8WW18 174 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 RAB3IPQ96QF0 476 aaPredicted RBP12.53□□□□□ -0.4
CDR2-206ENST00000567406 RBM4BQ9BQ04 359 aaKnown RBP12.53□□□□□ -0.4
CDR2-206ENST00000567406 RTL8AQ9BWD3 113 aa12.53□□□□□ -0.4
CDR2-206ENST00000567406 NPFFO15130 113 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 APOC1P02654 83 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 RAP2AP10114 183 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 NDUFB7P17568 137 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
CDR2-206ENST00000567406 PAX6P26367 422 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 GABRA2P47869 451 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 GPM6AP51674 278 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 MNAT1P51948 309 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 CEP78Q5JTW2 689 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 ATPAF1Q5TC12 328 aaPredicted RBP12.52□□□□□ -0.41
CDR2-206ENST00000567406 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 ADGRG5Q8IZF4 528 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 ZSCAN4Q8NAM6 433 aaPredicted RBP12.52□□□□□ -0.41
CDR2-206ENST00000567406 TNFRSF14Q92956 283 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 PPP1R14AQ96A00 147 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 C12orf43Q96C57 262 aaKnown RBP12.52□□□□□ -0.41
CDR2-206ENST00000567406 LRGUKQ96M69 825 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 DPAGT1Q9H3H5 408 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 ZNRD1Q9P1U0 126 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 MPC1Q9Y5U8 109 aa12.52□□□□□ -0.41
CDR2-206ENST00000567406 MEIOCA2RUB1 952 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms