RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 UNC93AQ86WB7 457 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 HORMAD1Q86X24 394 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 PNKDQ8N490 385 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 DUSP18Q8NEJ0 188 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 OR5AR1Q8NGP9 310 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 OR1N2Q8NGR9 330 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 OR6N2Q8NGY6 317 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 ZNF461Q8TAF7 563 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 ERMNQ8TAM6 284 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 APH1BQ8WW43 257 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.28□□□□□ -1.72
KARS-208ENST00000566772 C1orf147Q96MC9 270 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 MICU1Q9BPX6 476 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 CCDC94Q9BW85 323 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 CALN1Q9BXU9 219 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 SYT4Q9H2B2 425 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 PLGRKTQ9HBL7 147 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 ABCB10Q9NRK6 738 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 ENPP5Q9UJA9 477 aa4.28□□□□□ -1.72
KARS-208ENST00000566772 V9GYY5 206 aaPredicted RBP4.28□□□□□ -1.72
KARS-208ENST00000566772 GREB1Q4ZG55 1949 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 SPEGQ15772 3267 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 NUP210Q8TEM1 1887 aaPredicted RBP4.27□□□□□ -1.73
KARS-208ENST00000566772 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 A0A0J9YXY3 114 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 TRPC5OSA6NMA1 111 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 HACD1B0YJ81 288 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 GABRPO00591 440 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 TNFSF11O14788 317 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 LYPLA2O95372 231 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 CST4P01036 141 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 HOXC4P09017 264 aaPredicted RBP4.27□□□□□ -1.73
KARS-208ENST00000566772 OR4Q2P0C623 313 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 PRPS2P11908 318 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 TDGF1P13385 188 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 TCP1P17987 556 aaKnown RBP4.27□□□□□ -1.73
KARS-208ENST00000566772 HRH1P35367 487 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 PRPS1P60891 318 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 PAFAH1B2P68402 229 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 COTL1Q14019 142 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 ATAD3CQ5T2N8 411 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 UBE2UQ5VVX9 321 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 RNLSQ5VYX0 342 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 WDR82Q6UXN9 313 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 LINC00173Q6ZV60 143 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 PEX26Q7Z412 305 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 KRTAP7-1Q8IUC3 87 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 RHOXF1Q8NHV9 184 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 C7orf33Q8WU49 177 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 GEMIN6Q8WXD5 167 aaKnown RBP4.27□□□□□ -1.73
KARS-208ENST00000566772 TCEAL3Q969E4 200 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 SCGB3A2Q96PL1 93 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 UQCC2Q9BRT2 126 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 AGMATQ9BSE5 352 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 NICN1Q9BSH3 213 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 GABARAPL3Q9BY60 117 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 DEFB126Q9BYW3 111 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 SLC25A22Q9H936 323 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 VCX3AQ9NNX9 186 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 CCL28Q9NRJ3 127 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 MDFICQ9P1T7 246 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 SHPKQ9UHJ6 478 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 MRM2Q9UI43 246 aaKnown RBP4.27□□□□□ -1.73
KARS-208ENST00000566772 MOKQ9UQ07 419 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 CITO14578 2027 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 PKD1L2Q7Z442 2459 aa4.27□□□□□ -1.73
KARS-208ENST00000566772 CNOT1A5YKK6 2376 aaKnown RBP4.26□□□□□ -1.73
KARS-208ENST00000566772 TRAV39A0A0B4J263 110 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 K7EN84 100 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 ZMPSTE24O75844 475 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 HPNP05981 417 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 GIG44P09565 113 aaPredicted RBP4.26□□□□□ -1.73
KARS-208ENST00000566772 ICAM2P13598 275 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 USF1P22415 310 aaPredicted RBP4.26□□□□□ -1.73
KARS-208ENST00000566772 TPM4P67936 248 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 WDR31Q8NA23 367 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 OR52E2Q8NGJ4 325 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 OR2G3Q8NGZ4 309 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 OR51E1Q8TCB6 317 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 LGALS14Q8TCE9 139 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 CDKL2Q92772 493 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 FOXN4Q96NZ1 517 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 NDEL1Q9GZM8 345 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 MS4A12Q9NXJ0 267 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 NXT1Q9UKK6 140 aaKnown RBP4.26□□□□□ -1.73
KARS-208ENST00000566772 TNFRSF18Q9Y5U5 241 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 MRPS18BQ9Y676 258 aaKnown RBP4.26□□□□□ -1.73
KARS-208ENST00000566772 PRSS21Q9Y6M0 314 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 SPAG17Q6Q759 2223 aa4.26□□□□□ -1.73
KARS-208ENST00000566772 ASPMQ8IZT6 3477 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 TCHHQ07283 1943 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 F5P12259 2224 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 IGLV1-36A0A0B4J1U3 117 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 MYBPHLA2RUH7 354 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 MGAT4DA6NG13 374 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 TVP23AA6NH52 213 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 FAM166BA8MTA8 275 aa4.25□□□□□ -1.73
KARS-208ENST00000566772 PRMT5O14744 637 aaPredicted RBP4.25□□□□□ -1.73
KARS-208ENST00000566772 SNAI2O43623 268 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms