RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 MFNGO00587 321 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 AGPAT2O15120 278 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 CD79AP11912 226 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 RPL35P42766 123 aaKnown RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 CLDN17P56750 224 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 OR5L2Q8NGL0 311 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 OR4A4PQ8NGN8 299 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 ZNF768Q9H5H4 540 aaKnown RBP12.55□□□□□ -0.4
CDH1-209ENST00000566510 ZNF160Q9HCG1 818 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 MYOTQ9UBF9 498 aa12.55□□□□□ -0.4
CDH1-209ENST00000566510 CEP192Q8TEP8 1941 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 PTGFRP43088 359 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 NAAAQ02083 359 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 PNLIPRP3Q17RR3 467 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 AKIRIN2Q53H80 203 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 AADACL3Q5VUY0 350 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 CARFQ8N187 725 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 SCRG1O75711 98 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 SERPINA5P05154 406 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 FCGR2AP12318 317 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 FAHP16930 419 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 IGFBP4P22692 258 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 TGIF2Q9GZN2 237 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 PNRC2Q9NPJ4 139 aaKnown RBP12.54□□□□□ -0.4
CDH1-209ENST00000566510 MMP26Q9NRE1 261 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 TMEM100Q9NV29 134 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 UQCC1Q9NVA1 299 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 LPAR3Q9UBY5 353 aa12.54□□□□□ -0.4
CDH1-209ENST00000566510 FRYLO94915 3013 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 MBTPS2O43462 519 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 LRP3O75074 770 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 FBXO24O75426 580 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 FAM157CP0CG43 387 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 GABRR1P24046 479 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 MSX1P28360 303 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 Q7L0L9 218 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 LINC00518Q8N0U6 118 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 CADM4Q8NFZ8 388 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 OR6X1Q8NH79 312 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 PIGTQ969N2 578 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 C2orf50Q96LR7 162 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 OXGR1Q96P68 337 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 CRB3Q9BUF7 120 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 NDRG3Q9UGV2 375 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
CDH1-209ENST00000566510 MED6O75586 246 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 ZFAND5O76080 213 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 SNAPINO95295 136 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 HPNP05981 417 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 PET100P0DJ07 73 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 RCC1P18754 421 aaPredicted RBP12.53□□□□□ -0.4
CDH1-209ENST00000566510 NME2P22392 152 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 CBX5P45973 191 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 P2RY4P51582 365 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 TAS2R46P59540 309 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 FAM189A2Q15884 450 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 RPL7L1Q6DKI1 246 aaKnown RBP12.53□□□□□ -0.4
CDH1-209ENST00000566510 OR14K1Q8NGZ2 314 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 RHOFQ9HBH0 211 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 TAF9BQ9HBM6 251 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 FANCFQ9NPI8 374 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 PISDQ9UG56 409 aa12.53□□□□□ -0.4
CDH1-209ENST00000566510 IGHV3-15A0A0B4J1V0 119 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 NDUFA2O43678 99 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 TLX3O43711 291 aaPredicted RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 CSTBP04080 98 aaKnown RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 NFYBP25208 207 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 PTGDSP41222 190 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 GRB2P62993 217 aaKnown RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 ECH1Q13011 328 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 CHAF1BQ13112 559 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 WDR74Q6RFH5 385 aaPredicted RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 C6orf201Q7Z4U5 140 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 CPEB2Q7Z5Q1 589 aaKnown RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 KMT5CQ86Y97 462 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 NECAB3Q96P71 396 aaPredicted RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 WDR77Q9BQA1 342 aaPredicted RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 ZNF175Q9Y473 711 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 OR5H15A6NDH6 313 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 SRFP11831 508 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 RBMXP38159 391 aaKnown RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 DCDP81605 110 aaKnown RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 PJVKQ0ZLH3 352 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 HFEQ30201 348 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 LCN10Q6JVE6 187 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 ZNF574Q6ZN55 896 aaPredicted RBP12.52□□□□□ -0.41
CDH1-209ENST00000566510 LYZL4Q96KX0 146 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 PECRQ9BY49 303 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 DEFB126Q9BYW3 111 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 SMIM3Q9BZL3 60 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 PLEKHJ1Q9NW61 149 aa12.52□□□□□ -0.41
CDH1-209ENST00000566510 SCGB1D2O95969 90 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 ACY1Q03154 408 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 UBE2V2Q15819 145 aa12.51□□□□□ -0.41
CDH1-209ENST00000566510 IAH1Q2TAA2 248 aaPredicted RBP12.51□□□□□ -0.41
CDH1-209ENST00000566510 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms