RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ACOD1A6NK06 481 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 ZNF850A8MQ14 1090 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.67■□□□□ 0.26
CLN6-207ENST00000566347 DYNC1I1O14576 645 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 FCN3O75636 299 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 IGHV1-69P01742 117 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 ACKR3P25106 362 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 ARF6P62330 175 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 SNAPC1Q16533 368 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 PRR31Q5SQ13 230 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 KCTD18Q6PI47 426 aaPredicted RBP16.67■□□□□ 0.26
CLN6-207ENST00000566347 DEGS2Q6QHC5 323 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 OR8B12Q8NGG6 310 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 LHX4Q969G2 390 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 TMIGD2Q96BF3 282 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 PKP2Q99959 881 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 DNTTIP1Q9H147 329 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 ZNF696Q9H7X3 374 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 PAPOLBQ9NRJ5 636 aaKnown RBP16.67■□□□□ 0.26
CLN6-207ENST00000566347 ACOXLQ9NUZ1 547 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 POMPQ9Y244 141 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 POMT1Q9Y6A1 747 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 PKD1L1Q8TDX9 2849 aa16.67■□□□□ 0.26
CLN6-207ENST00000566347 NDUFB3O43676 98 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 DNAJC8O75937 253 aaPredicted RBP16.66■□□□□ 0.26
CLN6-207ENST00000566347 CRYBA1P05813 215 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 APOFQ13790 326 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 CDONQ4KMG0 1287 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 FAM76BQ5HYJ3 339 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 ATPAF1Q5TC12 328 aaPredicted RBP16.66■□□□□ 0.26
CLN6-207ENST00000566347 LCN1P1Q5VSP4 162 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 TMEM236Q5W0B7 351 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 STUMQ69YW2 141 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 ZDHHC23Q8IYP9 409 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 FAM81AQ8TBF8 368 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 BCAS4Q8TDM0 211 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 PIGCQ92535 297 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 RNF170Q96K19 258 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 LYZL4Q96KX0 146 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 HIST1H2AAQ96QV6 131 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 SLITRK2Q9H156 845 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 HAO2Q9NYQ3 351 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 TVP23BQ9NYZ1 205 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 DNAJB11Q9UBS4 358 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 MMP24Q9Y5R2 645 aa16.66■□□□□ 0.26
CLN6-207ENST00000566347 A0A0U1RQV5 110 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 A0A1B0GUS0 222 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 A0A1B0GVI7 797 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 FAM181BA6NEQ2 426 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 MELTFP08582 738 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 MAP2K3P46734 347 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 CRISP1P54107 249 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 LRRC10Q5BKY1 277 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 KCTD8Q6ZWB6 473 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 CMTM4Q8IZR5 234 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 FAM216BQ8N7L0 139 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 SCCPDHQ8NBX0 429 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 LY6G5BQ8NDX9 201 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 SSMEM1Q8WWF3 244 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 RPL3LQ92901 407 aaKnown RBP16.65■□□□□ 0.26
CLN6-207ENST00000566347 SLC7A6OSQ96CW6 309 aaPredicted RBP16.65■□□□□ 0.26
CLN6-207ENST00000566347 RAB3IPQ96QF0 476 aaPredicted RBP16.65■□□□□ 0.26
CLN6-207ENST00000566347 TEAD3Q99594 435 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 MROQ9BYG7 248 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 PRRG3Q9BZD7 231 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 TMEM14AQ9Y6G1 99 aa16.65■□□□□ 0.26
CLN6-207ENST00000566347 ZNF816-ZNF321PA0A0X1KG74 233 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 A0A1B0GW55 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 NKX6-3A6NJ46 265 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L2P0CJ85 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L3P0CJ86 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L4P0CJ87 422 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L5P0CJ88 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L6P0CJ89 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L7P0CJ90 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 ATP6V1B1P15313 513 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 MDKP21741 143 aaPredicted RBP16.64■□□□□ 0.25
CLN6-207ENST00000566347 DCTDP32321 178 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 TGM4P49221 684 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 FAHD1Q6P587 224 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4L9Q6RFH8 374 aaPredicted RBP16.64■□□□□ 0.25
CLN6-207ENST00000566347 FIP1L1Q6UN15 594 aaKnown RBP16.64■□□□□ 0.25
CLN6-207ENST00000566347 KRT74Q7RTS7 529 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 KIR3DL3Q8N743 410 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 TBC1D15Q8TC07 691 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 HPSE2Q8WWQ2 592 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 ASB17Q8WXJ9 295 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 SEH1LQ96EE3 360 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 TNFRSF19Q9NS68 423 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 ONECUT1Q9UBC0 465 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 DUX4Q9UBX2 424 aa16.64■□□□□ 0.25
CLN6-207ENST00000566347 TMEM269A0A1B0GVZ9 245 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 ZNF254O75437 659 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 OMGP23515 440 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 HCCSP53701 268 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 GMFBP60983 142 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 RPL15P61313 204 aaKnown RBP16.63■□□□□ 0.25
CLN6-207ENST00000566347 ESRRGP62508 458 aa16.63■□□□□ 0.25
CLN6-207ENST00000566347 ELF3P78545 371 aaPredicted RBP16.63■□□□□ 0.25
CLN6-207ENST00000566347 IKZF1Q13422 519 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms