RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 FAM76BQ5HYJ3 339 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 C16orf87Q6PH81 154 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 Q6YL49 198 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 FTMTQ8N4E7 242 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 LY6G5BQ8NDX9 201 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 OR10Z1Q8NGY1 313 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 C12orf43Q96C57 262 aaKnown RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 TEAD3Q99594 435 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 CCL13Q99616 98 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 RTL8AQ9BWD3 113 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 CADM1Q9BY67 442 aaKnown RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 YIPF3Q9GZM5 350 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 ABCB9Q9NP78 766 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 NOX4Q9NPH5 578 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 PAPOLBQ9NRJ5 636 aaKnown RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 FAM206AQ9NX38 181 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 TVP23BQ9NYZ1 205 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 RPUSD1Q9UJJ7 312 aaKnown RBP12.94□□□□□ -0.34
CDH3-204ENST00000565453 ZNF391Q9UJN7 358 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 LAMP5Q9UJQ1 280 aa12.94□□□□□ -0.34
CDH3-204ENST00000565453 TMEM210A6NLX4 147 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 GSC2O15499 205 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 SPRY1O43609 319 aaPredicted RBP12.93□□□□□ -0.34
CDH3-204ENST00000565453 DCTDP32321 178 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 TGM4P49221 684 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 RPS7P62081 194 aaKnown RBP12.93□□□□□ -0.34
CDH3-204ENST00000565453 IL13RA1P78552 427 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 SNAPC1Q16533 368 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 ATPAF1Q5TC12 328 aaPredicted RBP12.93□□□□□ -0.34
CDH3-204ENST00000565453 STUMQ69YW2 141 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 DEGS2Q6QHC5 323 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 FAM216BQ8N7L0 139 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 ST8SIA4Q92187 359 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 RPL3LQ92901 407 aaKnown RBP12.93□□□□□ -0.34
CDH3-204ENST00000565453 PKP2Q99959 881 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 UNKLQ9H9P5 680 aaKnown RBP12.93□□□□□ -0.34
CDH3-204ENST00000565453 COPS3Q9UNS2 423 aa12.93□□□□□ -0.34
CDH3-204ENST00000565453 A0A0U1RQV5 110 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 ACOD1A6NK06 481 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 IGLV3-1P01715 115 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 MELTFP08582 738 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 ARF6P62330 175 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 PDCD1Q15116 288 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 PTGES3Q15185 160 aaKnown RBP12.92□□□□□ -0.34
CDH3-204ENST00000565453 METTL11BQ5VVY1 283 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 SLC36A1Q7Z2H8 476 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 KRT77Q7Z794 578 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 SCCPDHQ8NBX0 429 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 OR5K1Q8NHB7 308 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 PIGCQ92535 297 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 ZDHHC16Q969W1 377 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 RAB3IPQ96QF0 476 aaPredicted RBP12.92□□□□□ -0.34
CDH3-204ENST00000565453 TEX12Q9BXU0 123 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 CNTD2Q9H8S5 307 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 HAO2Q9NYQ3 351 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 KPTNQ9Y664 436 aa12.92□□□□□ -0.34
CDH3-204ENST00000565453 IGHV1-69DA0A0B4J2H0 117 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 PSMD9O00233 223 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 PRKYO43930 277 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 IGHV1-69P01742 117 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 MRPL3P09001 348 aaKnown RBP12.91□□□□□ -0.34
CDH3-204ENST00000565453 EFNB1P98172 346 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 ROM1Q03395 351 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 BNIP1Q12981 228 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 LCN1P1Q5VSP4 162 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 KCTD18Q6PI47 426 aaPredicted RBP12.91□□□□□ -0.34
CDH3-204ENST00000565453 ZDHHC23Q8IYP9 409 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 TMEM86BQ8N661 226 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 GATAD2BQ8WXI9 593 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 LHX4Q969G2 390 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 ITFG2Q969R8 447 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 TMIGD2Q96BF3 282 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 RNF170Q96K19 258 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 DMRTB1Q96MA1 342 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 OR8B4Q96RC9 309 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 DNTTIP1Q9H147 329 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 ACOXLQ9NUZ1 547 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 KIF17Q9P2E2 1029 aa12.91□□□□□ -0.34
CDH3-204ENST00000565453 ZNF816-ZNF321PA0A0X1KG74 233 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 TMEM269A0A1B0GVZ9 245 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 POM121CA8CG34 1229 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 GPR37O15354 613 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
CDH3-204ENST00000565453 SRSF10O75494 262 aaKnown RBP12.9□□□□□ -0.34
CDH3-204ENST00000565453 SELLP14151 372 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 MDKP21741 143 aaPredicted RBP12.9□□□□□ -0.34
CDH3-204ENST00000565453 MAP2K3P46734 347 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 ESRRGP62508 458 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 CDONQ4KMG0 1287 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 ZNF788Q6ZQV5 615 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 BCDIN3DQ7Z5W3 292 aaKnown RBP12.9□□□□□ -0.34
CDH3-204ENST00000565453 ZNF679Q8IYX0 411 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 OR5T2Q8NGG2 359 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 ANGPTL6Q8NI99 470 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 C8orf46Q8TAG6 207 aa12.9□□□□□ -0.34
CDH3-204ENST00000565453 FAM71F1Q96KD3 344 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms