RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 ZBTB49Q6ZSB9 765 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 SYT9Q86SS6 491 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 CELF2-AS1Q8N7Q2 184 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 OR51G2Q8NGK0 314 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 NABP1Q96AH0 204 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 EME1Q96AY2 570 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 Q96M85 177 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 RDH12Q96NR8 316 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 ASCL2Q99929 193 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 PRRG3Q9BZD7 231 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 MEGF9Q9H1U4 602 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 POFUT1Q9H488 388 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 SIRT7Q9NRC8 400 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 INPP5EQ9NRR6 644 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 TBC1D23Q9NUY8 699 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 VSX1Q9NZR4 365 aaPredicted RBP7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 RNF7Q9UBF6 113 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 CTSZQ9UBR2 303 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 UGT2A1Q9Y4X1 527 aa7.36□□□□□ -1.23
VPS9D1-205ENST00000565452 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 ANKRD65E5RJM6 399 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 DVL1O14640 695 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 RAMP3O60896 148 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 FAM20BO75063 409 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SLC2A10O95528 541 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 ALPLP05186 524 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 PAICSP22234 425 aaKnown RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 LAP3P28838 519 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 BLVRAP53004 296 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 DGCR2P98153 550 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 CD47Q08722 323 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 KRR1Q13601 381 aaKnown RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 LRRC75BQ2VPJ9 315 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SLC36A3Q495N2 470 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SLC25A47Q6Q0C1 308 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 CRIP3Q6Q6R5 217 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 HS3ST5Q8IZT8 346 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 Q8N2B8 174 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 PACRGLQ8N7B6 248 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 BOLLQ8N9W6 283 aaKnown RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 LY6G5BQ8NDX9 201 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 NOXO1Q8NFA2 376 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 OR5AU1Q8NGC0 362 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 WIPF2Q8TF74 440 aaPredicted RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 ST8SIA4Q92187 359 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 HDAC2Q92769 488 aaKnown RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 PRSS22Q9GZN4 317 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 WNT10AQ9GZT5 417 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 EGLN3Q9H6Z9 239 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 ZNF702PQ9H963 129 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SLC25A19Q9HC21 320 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SMURF1Q9HCE7 757 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 DNAJB11Q9UBS4 358 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 SF3B6Q9Y3B4 125 aaKnown RBP7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 ADAM18Q9Y3Q7 739 aa7.35□□□□□ -1.23
VPS9D1-205ENST00000565452 TCRBV4S1A1TA0A5B7 111 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RIIAD1A6NNX1 92 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 F2RL2O00254 374 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 SOCS2O14508 198 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 CASQ2O14958 399 aaPredicted RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 KHDRBS3O75525 346 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 HIST1H1CP16403 213 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 ZNF3P17036 446 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 CDKN2AP42771 156 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RGS6P49758 472 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 TOP3AQ13472 1001 aaPredicted RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 HABP2Q14520 560 aaPredicted RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 GINS1Q14691 196 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 PTGES3Q15185 160 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RCN1Q15293 331 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 ARSJQ5FYB0 599 aaPredicted RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 CLEC12AQ5QGZ9 265 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 NCR3LG1Q68D85 454 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 FBXW12Q6X9E4 464 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 ZBTB46Q86UZ6 589 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 TRUB1Q8WWH5 349 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RORBQ92753 470 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RASD2Q96D21 266 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 NMD3Q96D46 503 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 OR5M11Q96RB7 305 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 CIB1Q99828 191 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 VCXQ9H320 206 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 FN3KQ9H479 309 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 CMC2Q9NRP2 79 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 UFSP2Q9NUQ7 469 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 LSM4Q9Y4Z0 139 aaKnown RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 TSSC4Q9Y5U2 329 aaPredicted RBP7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 PCLOQ9Y6V0 5065 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 RYR1P21817 5038 aa7.34□□□□□ -1.23
VPS9D1-205ENST00000565452 TEX13CA0A0J9YWL9 993 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 RBMY1BA6NDE4 496 aaKnown RBP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 RBMY1EA6NEQ0 496 aaKnown RBP7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 OOEPA6NGQ2 149 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 SAC3D1A6NKF1 404 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 ZAR1LA6NP61 321 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 H0YJX3 145 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 J3QW42 95 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 MLNRO43193 412 aa7.33□□□□□ -1.24
VPS9D1-205ENST00000565452 SOX14O95416 240 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms