RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SULT1A1P50225 295 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SULT1A2P50226 295 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NDUFA6P56556 154 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ACY1Q03154 408 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 BRICD5Q6PL45 260 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 POC1AQ8NBT0 407 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 HSD11B1P28845 292 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GLP1RP43220 463 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SLC26A5P58743 744 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 EIF5AL1Q6IS14 154 aaKnown RBP18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SLAMF9Q96A28 289 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 DOCK8Q8NF50 2099 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 LOC390937A0A1W2PQ73 354 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GPR37O15354 613 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PTGER4P35408 488 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 BIDP55957 195 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OR2B11Q5JQS5 317 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 WDSUB1Q8N9V3 476 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TCTEX1D2Q8WW35 142 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MRGPRX1Q96LB2 322 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RARRES2Q99969 163 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GPR84Q9NQS5 396 aa18.12■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PTPRSQ13332 1948 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM157AC9JC47 383 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CDC14BO60729 498 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MYF5P13349 255 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PGCP20142 388 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 S100PP25815 95 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 BLVRBP30043 206 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RBMXP38159 391 aaKnown RBP18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FOXK1P85037 733 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TMEM106CQ9BVX2 250 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TIMM10BQ9Y5J6 103 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TCRBV21S2A2A0A5A6 115 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 BPNT1O95861 308 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TNFP01375 233 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 IGHV2-70P01814 119 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 JMJD7P0C870 316 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 AGAP20933 346 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 DTWD2Q8NBA8 298 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF784Q8NCA9 323 aaPredicted RBP18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OR10S1Q8NGN2 331 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SGK3Q96BR1 496 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CYP8B1Q9UNU6 501 aa18.11■□□□□ 0.49
MAP1LC3B-206ENST00000564844 KLK3P07288 261 aaPredicted RBP18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 EFNA3P52797 238 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FXYD4P59646 89 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CHRFAM7AQ494W8 412 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF343Q6P1L6 599 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GGACTQ9BVM4 153 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RNF122Q9H9V4 155 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM206AQ9NX38 181 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM221AA4D161 298 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 HSPB2A8KAH6 182 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MS4A18H0YCH9 400 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RER1O15258 196 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GIMD1P0DJR0 217 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 GABRR1P24046 479 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NOVA1P51513 510 aaKnown RBP18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RRADP55042 308 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FBXW4P57775 412 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TLE3Q04726 772 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NSDHLQ15738 373 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 HSPB2Q16082 182 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 MS4A18Q3C1V0 323 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ACTBL2Q562R1 376 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TMEM92Q6UXU6 159 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C7orf61Q8IZ16 206 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ARHGEF39Q8N4T4 335 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF107Q9UII5 783 aaPredicted RBP18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ABCA7Q8IZY2 2146 aa18.1■□□□□ 0.49
MAP1LC3B-206ENST00000564844 A8MVM7 634 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NUDT19A8MXV4 375 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ADAM10O14672 748 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 DXOO77932 396 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 PPP1CCP36873 323 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 EIF2S3P41091 472 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SLC6A9P48067 706 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FAM57BQ71RH2 274 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 KPTNQ9Y664 436 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NCOA6Q14686 2063 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 IGHV5-51A0A0C4DH38 117 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 TMEM14DPA8MWL7 114 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CST4P01036 141 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 OPRM1P35372 400 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CHAF1BQ13112 559 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 KIAA0141Q14154 515 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C6orf201Q7Z4U5 140 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 C9orf40Q8IXQ3 194 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 DAZLQ92904 295 aaKnown RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 CNTNAP3Q9BZ76 1288 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 SEBOXQ9HB31 216 aaPredicted RBP18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ZNF581Q9P0T4 197 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 B3GALT1Q9Y5Z6 326 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 IFNA2P01563 188 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 FBP1P09467 338 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 RNF224P0DH78 156 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 NHLH2Q02577 135 aa18.09■□□□□ 0.49
MAP1LC3B-206ENST00000564844 ALKBH2Q6NS38 261 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms