RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 AGTR1P30556 359 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 MC2RQ01718 297 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 KISS1Q15726 138 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 UBE2V2Q15819 145 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 PDSS1Q5T2R2 415 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 DRAM2Q6UX65 266 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 CLEC18BQ6UXF7 455 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 DNASE2BQ8WZ79 361 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 MR1Q95460 341 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 METTL8Q9H825 291 aaKnown RBP11.86□□□□□ -0.51
CLK3-215ENST00000564353 EHFQ9NZC4 300 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 EDARQ9UNE0 448 aa11.86□□□□□ -0.51
CLK3-215ENST00000564353 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
CLK3-215ENST00000564353 CHCHD2Q9Y6H1 151 aaPredicted RBP11.86□□□□□ -0.51
CLK3-215ENST00000564353 ZDBF2Q9HCK1 2354 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 IGLV3-12A0A075B6K2 115 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 TNFSF11O14788 317 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 SFTPBP07988 381 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 UBBP0CG47 229 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 OR3A2P47893 321 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 RRADP55042 308 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SNU13P55769 128 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 RPS18P62269 152 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 RPS27AP62979 156 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 UBA52P62987 128 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 SNTB1Q13884 538 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 HLA-BQ31612 363 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 ANKRD55Q3KP44 614 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SLC25A47Q6Q0C1 308 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 ACOT7LQ6ZUV0 252 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 TERB2Q8NHR7 220 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 CPNE2Q96FN4 548 aaPredicted RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 OR10C1Q96KK4 312 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 PARP12Q9H0J9 701 aaKnown RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 GAREM1Q9H706 876 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 PRDM6Q9NQX0 595 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 GPR173Q9NS66 373 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 PIGLQ9Y2B2 252 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 A0A0D9SG52 128 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 A0A1W2PNV4 684 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 IGHV3-9P01782 118 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 RNF224P0DH78 156 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 FGL1Q08830 312 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 LPAL2Q16609 132 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SNAI3Q3KNW1 292 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 OVCH2Q7RTZ1 564 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SPEM1Q8N4L4 309 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 ZSCAN4Q8NAM6 433 aaPredicted RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 OR5H2Q8NGV7 314 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 OR13G1Q8NGZ3 307 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 HLA-CQ95604 372 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 SMOC1Q9H4F8 434 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 PLEK2Q9NYT0 353 aa11.85□□□□□ -0.51
CLK3-215ENST00000564353 KLF2Q9Y5W3 355 aaPredicted RBP11.85□□□□□ -0.51
CLK3-215ENST00000564353 KRBOX1C9JBD0 128 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 K7ESF4 209 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 GPR31O00270 319 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 MELTFP08582 738 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 CNR1P21554 472 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 GUCA1AP43080 201 aaPredicted RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 PPIAP62937 165 aaKnown RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 PGAP1Q75T13 922 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 KMT5CQ86Y97 462 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 OXGR1Q96P68 337 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 SEMA5BQ9P283 1151 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 ZFHX4Q86UP3 3567 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 A0A0A6YYH2 397 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 FAM230AA0A1W2PPH8 454 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 TUBAL3A6NHL2 446 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 A6NJ64 397 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 AGPAT2O15120 278 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 PDGFBP01127 241 aaPredicted RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 FABP1P07148 127 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 CD37P11049 281 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 PSMB6P28072 239 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 EPHA8P29322 1005 aaPredicted RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 OPRM1P35372 400 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 CSNK1A1P48729 337 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 HDDC2Q7Z4H3 204 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 YRDCQ86U90 279 aaKnown RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 HOGA1Q86XE5 327 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
CLK3-215ENST00000564353 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
CLK3-215ENST00000564353 A0A0G2JMM0 328 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 A0A1W2PPB8 328 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 A0A1W2PRS3 328 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 KIR3DP1A8MWS1 328 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 HPNP05981 417 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 CRHP06850 196 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 CALCRP30988 508 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
CLK3-215ENST00000564353 SSTP61278 116 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 ZNF385CQ66K41 422 aaPredicted RBP11.83□□□□□ -0.52
CLK3-215ENST00000564353 TMEM156Q8N614 296 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 OR6X1Q8NH79 312 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 KCNG3Q8TAE7 436 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 PTX4Q96A99 478 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 SMIM3Q9BZL3 60 aa11.83□□□□□ -0.52
CLK3-215ENST00000564353 SLC6A15Q9H2J7 730 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms