RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 SMIM4Q8WVI0 70 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 C11orf40Q8WZ69 217 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 RADILQ96JH8 1075 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 GFI1Q99684 422 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 COMMD4Q9H0A8 199 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 WNT5BQ9H1J7 359 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 KLHDC2Q9Y2U9 406 aa12.72□□□□□ -0.37
SCAMP2-203ENST00000563663 ZNF254O75437 659 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 DHFRP00374 187 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 CD8AP01732 235 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 SOD3P08294 240 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 ARSBP15848 533 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 CRABP1P29762 137 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 ERP29P30040 261 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 RRAS2P62070 204 aaPredicted RBP12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 SGCAQ16586 387 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 MSMPQ1L6U9 139 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 TEX30Q5JUR7 227 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 DPPA2Q7Z7J5 298 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 TOMM5Q8N4H5 51 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 GPR148Q8TDV2 347 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 UBASH3BQ8TF42 649 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 NANOS1Q8WY41 292 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 RNF170Q96K19 258 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 OR8B4Q96RC9 309 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 DPAGT1Q9H3H5 408 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 UBTD1Q9HAC8 227 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 TCF7L1Q9HCS4 588 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 DDX28Q9NUL7 540 aaKnown RBP12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 ING3Q9NXR8 418 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 PLEKHA6Q9Y2H5 1048 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 NUBP2Q9Y5Y2 271 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 LHFPL6Q9Y693 200 aa12.71□□□□□ -0.37
SCAMP2-203ENST00000563663 BTCP35070 178 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 LSM6P62312 80 aaKnown RBP12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 HIST1H3AP68431 136 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 MADCAM1Q13477 382 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 PABPC1L2AQ5JQF8 200 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 HIST2H3PS2Q5TEC6 136 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 HIST2H3AQ71DI3 136 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 DPY19L4Q7Z388 723 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 OR6N2Q8NGY6 317 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 DEDD2Q8WXF8 326 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 OR2H1Q9GZK4 316 aa12.71□□□□□ -0.38
SCAMP2-203ENST00000563663 CHD3Q12873 2000 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 HIVEP1P15822 2718 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 LOC100509620A0A075B734 347 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 C7orf66A4D0T2 115 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 ZNF593O00488 134 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 ECDO95905 644 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 NKX2-5P52952 324 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 CDK10Q15131 360 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 C11orf71Q6IPW1 123 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 SLC18B1Q6NT16 456 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 KCTD18Q6PI47 426 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 SLC22A25Q6T423 547 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 C20orf204Q6ZNR8 217 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 SYT9Q86SS6 491 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 DTX2Q86UW9 622 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 CMTM4Q8IZR5 234 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 NUP37Q8NFH4 326 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 AKR7LQ8NHP1 331 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 LGALS14Q8TCE9 139 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 NINJ1Q92982 152 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 FBXW5Q969U6 566 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 MBD6Q96DN6 1003 aa12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 S100A16Q96FQ6 103 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 RANGRFQ9HD47 186 aaPredicted RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 CISD1Q9NZ45 108 aaKnown RBP12.7□□□□□ -0.38
SCAMP2-203ENST00000563663 NAP1L6A6NFF2 107 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 TVP23AA6NH52 213 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 ACOD1A6NK06 481 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 GABARAPH6UMI1 98 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 RPP14O95059 124 aaKnown RBP12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 C1QBP02746 253 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 TESK1Q15569 626 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 PCK2Q16822 640 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 THEM6Q8WUY1 208 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 CAPSLQ8WWF8 208 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 POM121L2Q96KW2 1035 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 C4orf45Q96LM5 186 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 PNRC2Q9NPJ4 139 aaKnown RBP12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 ASH2LQ9UBL3 628 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 IKZF2Q9UKS7 526 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 OVOL3O00110 214 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 PSMD9O00233 223 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 ICMTO60725 284 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 CRYAAP02489 173 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 TCRBP04435 133 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 CD37P11049 281 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 CCL2P13500 99 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 AP3S2P59780 193 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 MRPS15P82914 257 aaKnown RBP12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 GLO1Q04760 184 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 KLF9Q13886 244 aaPredicted RBP12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 MST1LQ2TV78 715 aa12.69□□□□□ -0.38
SCAMP2-203ENST00000563663 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms