RNA–Protein interactions for RNA: ENST00000563448.1

SMG1-208, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-208ENST00000563448 TRMT10AQ8TBZ6 339 aaKnown RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 ACOT12Q8WYK0 555 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 FOXRED1Q96CU9 486 aaPredicted RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 METTL17Q9H7H0 456 aaPredicted RBP8.71□□□□□ -1.02
SMG1-208ENST00000563448 CNTD2Q9H8S5 307 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 PLGRKTQ9HBL7 147 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 ABCB9Q9NP78 766 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 NGBQ9NPG2 151 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 ABRACLQ9P1F3 81 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 FZR1Q9UM11 496 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 SPEF1Q9Y4P9 236 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 PEX16Q9Y5Y5 336 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 ICE1Q9Y2F5 2266 aa8.71□□□□□ -1.02
SMG1-208ENST00000563448 TUBAL3A6NHL2 446 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 RGS5O15539 181 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 HPGDSO60760 199 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 SELEP16581 610 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 KITLGP21583 273 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 HTR2CP28335 458 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 ZNF93P35789 620 aaPredicted RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 PLCXD3Q63HM9 321 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 MZT2AQ6P582 158 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 LINC00299Q6ZSB3 139 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 LAX1Q8IWV1 398 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 CDH26Q8IXH8 852 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 NUP37Q8NFH4 326 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 TMEM171Q8WVE6 324 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 DVL3Q92997 716 aaPredicted RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 PLPPR2Q96GM1 343 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 PAPOLGQ9BWT3 736 aaKnown RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 FGF23Q9GZV9 251 aaPredicted RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 LIN7BQ9HAP6 207 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 OR5V1Q9UGF6 321 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 PURGQ9UJV8 347 aaKnown RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 CMAHPQ9Y471 501 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 SPTBN1Q01082 2364 aaKnown RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 IGKV1-27A0A075B6S5 117 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 ANKRD30BLA7E2S9 258 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 MAGEB3O15480 346 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 SIAH2O43255 324 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 TMEM127O75204 238 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 INHBBP09529 407 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 OCMP0CE72 109 aaPredicted RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 ZNF250P15622 560 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 GCH1P30793 250 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 S100A5P33763 92 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 P2RY14Q15391 338 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 KISS1Q15726 138 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 RAB11BQ15907 218 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 MOGQ16653 247 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 VHLLQ6RSH7 139 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 LRP11Q86VZ4 500 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 OR51D1Q8NGF3 324 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 OR6M1Q8NGM8 313 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 LGALS14Q8TCE9 139 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 HPSE2Q8WWQ2 592 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 TECTBQ96PL2 329 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 SORCS2Q96PQ0 1159 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 UQCC2Q9BRT2 126 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 KCNK15Q9H427 330 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 ESRP2Q9H6T0 727 aaKnown RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 MRPL15Q9P015 296 aaKnown RBP8.7□□□□□ -1.02
SMG1-208ENST00000563448 SPATA2Q9UM82 520 aa8.7□□□□□ -1.02
SMG1-208ENST00000563448 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.69□□□□□ -1.02
SMG1-208ENST00000563448 FAM230AA0A1W2PPH8 454 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 C19orf84I3L1E1 186 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 CALCBP10092 127 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 BMP4P12644 408 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 PRKACBP22694 351 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 CA6P23280 308 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 TNFSF8P32971 234 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 OR3A4PP47883 348 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 FUT6P51993 359 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 PLA2G7Q13093 441 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 CEACAM21Q3KPI0 293 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 C2orf76Q3KRA6 126 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 SLC22A25Q6T423 547 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 DMRTC2Q8IXT2 367 aaPredicted RBP8.69□□□□□ -1.02
SMG1-208ENST00000563448 ZDHHC23Q8IYP9 409 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 FTMTQ8N4E7 242 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 OR8G5Q8NG78 346 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 ZNF671Q8TAW3 534 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 SYNPRQ8TBG9 265 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 RFT1Q96AA3 541 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 SPSB1Q96BD6 273 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 BORCS8Q96FH0 119 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 WDFY2Q96P53 400 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 AKIP1Q9NQ31 210 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 MYEF2Q9P2K5 600 aaKnown RBP8.69□□□□□ -1.02
SMG1-208ENST00000563448 SLC7A11Q9UPY5 501 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 MPC1Q9Y5U8 109 aa8.69□□□□□ -1.02
SMG1-208ENST00000563448 SHISA9B4DS77 424 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 EIF4EP06730 217 aaKnown RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 RNF224P0DH78 156 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ELK1P19419 428 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 MMP15P51511 669 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 RPS23P62266 143 aaKnown RBP8.68□□□□□ -1.02
SMG1-208ENST00000563448 RIN1Q13671 783 aa8.68□□□□□ -1.02
SMG1-208ENST00000563448 ADAM5Q6NVV9 412 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms