RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 NPIPA1Q9UND3 350 aa3.83□□□□□ -1.8
LINC00254-201ENST00000563416 RPH3ALQ9UNE2 315 aa3.83□□□□□ -1.8
LINC00254-201ENST00000563416 ABCG2Q9UNQ0 655 aa3.83□□□□□ -1.8
LINC00254-201ENST00000563416 USH1CQ9Y6N9 552 aa3.83□□□□□ -1.8
LINC00254-201ENST00000563416 ANKRD17O75179 2603 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ANKHD1Q8IWZ3 2542 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 TRAV26-1A0A087WT03 109 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 UQCRHLA0A096LP55 91 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 IGLV3-32A0A0A0MS00 114 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 GOLGA8QA0A0J9YX86 632 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 A0A1B0GUH1 482 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 LOC390937A0A1W2PQ73 354 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 FAM166BA8MTA8 275 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 B4DXG7 233 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 G3V3Y1 287 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 H0YL77 283 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ATP8B1O43520 1251 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 FADS1O60427 444 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 FCMRO60667 390 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 HCN1O60741 890 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 EDF1O60869 148 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ICOSLGO75144 302 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 C6orf47O95873 294 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 IGKV1D-16P01601 117 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 HMGN2P05204 90 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 HPNP05981 417 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 GUSBP08236 651 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 KRT16P08779 473 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ADORA3P0DMS8 318 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 IDO1P14902 403 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 IL12AP29459 219 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 IL12BP29460 328 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 LCN1P31025 176 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 EVI2BP34910 448 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PSMD4P55036 377 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 SH3BGRP55822 239 aaPredicted RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 RPL27P61353 136 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 MRPS22P82650 360 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PLGLB1Q02325 96 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ZNHIT3Q15649 155 aaPredicted RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 VPS26BQ4G0F5 336 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ANXA8L1Q5VT79 327 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 AP1ARQ63HQ0 302 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 TIGD3Q6B0B8 471 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 OR4F3Q6IEY1 312 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 ANGPTL8Q6UXH0 198 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 Q71RC1 249 aaPredicted RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 TRPM8Q7Z2W7 1104 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 TMEM17Q86X19 198 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 CLECL1Q8IZS7 167 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 FAM57AQ8TBR7 257 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 SSC4DQ8WTU2 575 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PHF10Q8WUB8 498 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 LIPHQ8WWY8 451 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 UPRTQ96BW1 309 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 EFHD2Q96C19 240 aaPredicted RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 CCDC115Q96NT0 180 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 CCDC28BQ9BUN5 200 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PIGUQ9H490 435 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 EXO5Q9H790 373 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 CRLF2Q9HC73 371 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 UFSP2Q9NUQ7 469 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 GHRLQ9UBU3 117 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 B4GALT7Q9UBV7 327 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 BTNL2Q9UIR0 455 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PURGQ9UJV8 347 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 TP53TG3Q9ULZ0 132 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 PIGLQ9Y2B2 252 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 GSTK1Q9Y2Q3 226 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 C15orf41Q9Y2V0 281 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 MRPS18CQ9Y3D5 142 aaKnown RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 WIF1Q9Y5W5 379 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 LRBAP50851 2863 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 NAV2Q8IVL1 2488 aa3.82□□□□□ -1.8
LINC00254-201ENST00000563416 RAI1Q7Z5J4 1906 aaPredicted RBP3.82□□□□□ -1.8
LINC00254-201ENST00000563416 A0A075B6Q4 140 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 TRGV5A0A0B4J1U4 118 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 TRGV8A0A0C4DH27 118 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 A0A1B0GTH9 108 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 A0A1W2PNV4 684 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 A0A1W2PQD3 144 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 BCKDKO14874 412 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 UBDO15205 165 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 POLR3GO15318 223 aaPredicted RBP3.81□□□□□ -1.8
LINC00254-201ENST00000563416 LRRTM2O43300 516 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 TNFSF12O43508 249 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 BCL2L11O43521 198 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 CDC40O60508 579 aaKnown RBP eCLIP3.81□□□□□ -1.8
LINC00254-201ENST00000563416 REM1O75628 298 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 KCNK2O95069 426 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 OXSR1O95747 527 aaPredicted RBP3.81□□□□□ -1.8
LINC00254-201ENST00000563416 OPN1LWP04000 364 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 IL6P05231 212 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 ALOX5P09917 674 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 ABOP16442 354 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 TBXA2RP21731 343 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 GDF1P27539 372 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 S100A3P33764 101 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 GABRA3P34903 492 aa3.81□□□□□ -1.8
LINC00254-201ENST00000563416 CCT3P49368 545 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 313.8 ms