RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 HAO2Q9NYQ3 351 aa10.66□□□□□ -0.7
SF3B3-202ENST00000562722 ZNF391Q9UJN7 358 aa10.66□□□□□ -0.7
SF3B3-202ENST00000562722 BAIAP2Q9UQB8 552 aa10.66□□□□□ -0.7
SF3B3-202ENST00000562722 WNK1Q9H4A3 2382 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-202ENST00000562722 H2BFMP0C1H6 154 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 GABRA5P31644 462 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 SAA4P35542 130 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 PPP1R8Q12972 351 aaKnown RBP10.65□□□□□ -0.7
SF3B3-202ENST00000562722 PRDX4Q13162 271 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 BLMHQ13867 455 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 NCR3LG1Q68D85 454 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 CYP2R1Q6VVX0 501 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 Q6ZTK2 550 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-202ENST00000562722 GALNT4Q8N4A0 578 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 Q8N7P7 452 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 OR4Q3Q8NH05 313 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 RPL3LQ92901 407 aaKnown RBP10.65□□□□□ -0.7
SF3B3-202ENST00000562722 ABHD6Q9BV23 337 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 NMNAT2Q9BZQ4 307 aa10.65□□□□□ -0.7
SF3B3-202ENST00000562722 SLC25A10Q9UBX3 287 aaPredicted RBP10.65□□□□□ -0.7
SF3B3-202ENST00000562722 NOTCH1P46531 2555 aa10.65□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF850A8MQ14 1090 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 AKR7A2O43488 359 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 TSPAN9O75954 239 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 TFF1P04155 84 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 GSTT1P30711 240 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 SLC35E4Q6ICL7 350 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF770Q6IQ21 691 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-202ENST00000562722 C16orf89Q6UX73 402 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 TIGD4Q8IY51 512 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 RNF133Q8WVZ7 376 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 PIGCQ92535 297 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 ITPKCQ96DU7 683 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 MED30Q96HR3 178 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 DMRTB1Q96MA1 342 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 RAB3IPQ96QF0 476 aaPredicted RBP10.64□□□□□ -0.71
SF3B3-202ENST00000562722 DNTTIP1Q9H147 329 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 TLNRD1Q9H1K6 362 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 WDR13Q9H1Z4 485 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 RGCCQ9H4X1 137 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 METTL8Q9H825 291 aaKnown RBP10.64□□□□□ -0.71
SF3B3-202ENST00000562722 MED20Q9H944 212 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 MPC1Q9Y5U8 109 aa10.64□□□□□ -0.71
SF3B3-202ENST00000562722 FAM183AA6NL82 134 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 TMEM210A6NLX4 147 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 H0YAE9 185 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 H3BUX3 64 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 AMY2BP19961 511 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 OPRL1P41146 370 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 GABRA2P47869 451 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 TGM4P49221 684 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 UBE2E1P51965 193 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 HMGA2P52926 109 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 LY6EQ16553 131 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 DGUOKQ16854 277 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 KLHL12Q53G59 568 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 ATPAF1Q5TC12 328 aaPredicted RBP10.63□□□□□ -0.71
SF3B3-202ENST00000562722 SHFQ7M4L6 423 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 DEFB107AQ8IZN7 70 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 PAPD5Q8NDF8 572 aaKnown RBP10.63□□□□□ -0.71
SF3B3-202ENST00000562722 TMEM185AQ8NFB2 350 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 OR51G2Q8NGK0 314 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 OR4C13Q8NGP0 309 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 OR10Z1Q8NGY1 313 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 C8orf46Q8TAG6 207 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 FAM81AQ8TBF8 368 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 TEX47Q8TBZ9 253 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 DUS3LQ96G46 650 aaKnown RBP10.63□□□□□ -0.71
SF3B3-202ENST00000562722 RNF170Q96K19 258 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 GAFA1Q96PS6 74 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 HIST1H2AAQ96QV6 131 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 AMELYQ99218 206 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 FAM234AQ9H0X4 552 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 REEP1Q9H902 201 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 ABCB9Q9NP78 766 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 MED4Q9NPJ6 270 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 NDE1Q9NXR1 346 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF319Q9P2F9 582 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 TAGLN3Q9UI15 199 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 SIGLEC9Q9Y336 463 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 SAMHD1Q9Y3Z3 626 aaKnown RBP10.63□□□□□ -0.71
SF3B3-202ENST00000562722 U3KQV3 271 aa10.63□□□□□ -0.71
SF3B3-202ENST00000562722 OR2AT4A6NND4 320 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 H3BN98 237 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 M0R1W7 72 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 ANGPTL7O43827 346 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 PAICSP22234 425 aaKnown RBP10.62□□□□□ -0.71
SF3B3-202ENST00000562722 GLRA1P23415 457 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 CAPZA1P52907 286 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 ACSM1Q08AH1 577 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 HERPUD1Q15011 391 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 MICAQ29983 383 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 LINC01590Q5TEZ4 76 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 ZNF788Q6ZQV5 615 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 C1orf122Q6ZSJ8 110 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 PRSS45Q7RTY3 260 aa10.62□□□□□ -0.71
SF3B3-202ENST00000562722 ZDHHC23Q8IYP9 409 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms