RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 GKN2Q86XP6 184 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 LURAP1LQ8IV03 231 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 DEFB119Q8N690 84 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 C15orf54Q8N8G6 183 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 OR8U1Q8NH10 309 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 EMG1Q92979 244 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 C8orf33Q9H7E9 229 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 PARP11Q9NR21 331 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF701Q9NV72 531 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 ASH2LQ9UBL3 628 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 CD207Q9UJ71 328 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 A0A1W2PPC4 97 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 SCGB1D2O95969 90 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 BLVRBP30043 206 aaPredicted RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 C17orf67Q0P5P2 114 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 HYAL1Q12794 435 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 LCN10Q6JVE6 187 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF283Q8N7M2 679 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF441Q8N8Z8 693 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 PNLDC1Q8NA58 520 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 RLN3Q8WXF3 142 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 MVB12AQ96EY5 273 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 C1orf123Q9NWV4 160 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF319Q9P2F9 582 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 LSM5Q9Y4Y9 91 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 PCDH15Q96QU1 1955 aa12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 PHF3Q92576 2039 aaKnown RBP12.33□□□□□ -0.44
VPS9D1-202ENST00000561976 NPIPB13A6NJU9 1138 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 NPIPB4C9JG80 1138 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 IFNA2P01563 188 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 SNRNP70P08621 437 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RPS2P15880 293 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF708P17019 499 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 GABREP78334 506 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 IL15RAQ13261 267 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 THEM4Q5T1C6 240 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 OR1L3Q8NH93 324 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 FNDC9Q8TBE3 224 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 ELL3Q9HB65 397 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 GPR27Q9NS67 375 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RPH3AQ9Y2J0 694 aaPredicted RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 EPOPA6NHQ4 379 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 LIPT2A6NK58 231 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RER1O15258 196 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 JTBO76095 146 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 TSPAN15O95858 294 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 FOLR2P14207 255 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RNF4P78317 190 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 MFAP5Q13361 173 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 EIF2S3LQ2VIR3 472 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 UEVLDQ8IX04 471 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 RNF122Q9H9V4 155 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 ALKBH4Q9NXW9 302 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 CACFD1Q9UGQ2 172 aa12.32□□□□□ -0.44
VPS9D1-202ENST00000561976 PMS2P1A4D2B8 440 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 RHPN2P1A8MT19 583 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 SERPINA2P20848 420 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 ANOS1P23352 680 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 PTGER4P35408 488 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 ECH1Q13011 328 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 OR5B2Q96R09 309 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 RGCCQ9H4X1 137 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 PLA2G2EQ9NZK7 142 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 SZT2Q5T011 3432 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 M0R036 132 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 ADAM10O14672 748 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 TMEM33P57088 247 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 KRBOX4Q5JUW0 171 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 OR9K2Q8NGE7 335 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 FBXO17Q96EF6 278 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 S100A13Q99584 98 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 NAA11Q9BSU3 229 aaPredicted RBP12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 UCK1Q9HA47 277 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 POMT1Q9Y6A1 747 aa12.31□□□□□ -0.44
VPS9D1-202ENST00000561976 IFNA21P01568 189 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 IGHG1P01857 330 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF17P17021 662 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ACY1Q03154 408 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF616Q08AN1 781 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SPEM2Q0P670 501 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 CLEC9AQ6UXN8 241 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 DOK3Q7L591 496 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SULF2Q8IWU5 870 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 ZNF775Q96BV0 537 aaPredicted RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 PRRX2Q99811 253 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 PECRQ9BY49 303 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 MRPL13Q9BYD1 178 aaKnown RBP12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 B3GAT1Q9P2W7 334 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 IGKV1-9A0A0C4DH69 117 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 H3BMH7 237 aa12.3□□□□□ -0.44
VPS9D1-202ENST00000561976 S100A8P05109 93 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms