RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 CLVS2Q5SYC1 327 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 RTL6Q6ICC9 239 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 TMEM53Q6P2H8 277 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 CRIP3Q6Q6R5 217 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 LHFPL2Q6ZUX7 228 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 SLC36A1Q7Z2H8 476 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 RNF144BQ7Z419 303 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 TMEM104Q8NE00 496 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 BEST4Q8NFU0 473 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 OR8S1Q8NH09 359 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 FGFBP3Q8TAT2 258 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 CMBLQ96DG6 245 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 RAB3CQ96E17 227 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 S100A13Q99584 98 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 PRRT1Q99946 306 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 SEC22CQ9BRL7 303 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 ZNF436Q9C0F3 470 aaPredicted RBP11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 DEFB127Q9H1M4 99 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 BEX1Q9HBH7 125 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 GPR173Q9NS66 373 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 PLEKHA6Q9Y2H5 1048 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 CACNA1CQ13936 2221 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 PTPRZ1P23471 2315 aaPredicted RBP11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 FAM186AA6NE01 2351 aa11.01□□□□□ -0.65
AC055717.2-201ENST00000561864 FOXI3A8MTJ6 420 aaPredicted RBP11□□□□□ -0.65
AC055717.2-201ENST00000561864 MFNGO00587 321 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 CA11O75493 328 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 IGHV3-9P01782 118 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 RLN1P04808 185 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 ZNF735P0CB33 412 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 GNB3P16520 340 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 NAT1P18440 290 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 CXCL3P19876 107 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 CPT2P23786 658 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 ACKR3P25106 362 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 AGTR1P30556 359 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 CCL11P51671 97 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 ZP1P60852 638 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 RTP5Q14D33 572 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 PPA1Q15181 289 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 C3AR1Q16581 482 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 NDUFA5Q16718 116 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 RNFT1Q5M7Z0 435 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 IDO2Q6ZQW0 420 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 BPIFB2Q8N4F0 458 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 ASCC1Q8N9N2 400 aaKnown RBP11□□□□□ -0.65
AC055717.2-201ENST00000561864 FDCSPQ8NFU4 85 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 OR2AE1Q8NHA4 323 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 NPRL2Q8WTW4 380 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 DVL3Q92997 716 aaPredicted RBP11□□□□□ -0.65
AC055717.2-201ENST00000561864 PIGTQ969N2 578 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 NICN1Q9BSH3 213 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 GON7Q9BXV9 100 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 SELENOIQ9C0D9 397 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 TINAGL1Q9GZM7 467 aaPredicted RBP11□□□□□ -0.65
AC055717.2-201ENST00000561864 ZMAT3Q9HA38 289 aaKnown RBP11□□□□□ -0.65
AC055717.2-201ENST00000561864 GLRX2Q9NS18 164 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 B3GNT2Q9NY97 397 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 ZNF69Q9UC07 566 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 MED12Q93074 2177 aa11□□□□□ -0.65
AC055717.2-201ENST00000561864 PTPRBP23467 1997 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 ZNF816-ZNF321PA0A0X1KG74 233 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 TMEM82A0PJX8 343 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 M0QYG6 137 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 FABP7O15540 132 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SSX5O60225 188 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SS18L1O75177 396 aaPredicted RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 CEACAM4O75871 244 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SERPINA5P05154 406 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 GIPP09681 153 aaPredicted RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 VSIG10L2P0DP72 767 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 MGMTP16455 207 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SDHBP21912 280 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 MPGP29372 298 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 OR3A2P47893 321 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 NOVA1P51513 510 aaKnown RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 MTCP1P56278 107 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 FAM3AP98173 230 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SRSF6Q13247 344 aaKnown RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 CLN3Q13286 438 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SLC22A6Q4U2R8 563 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 NUFIP2Q7Z417 695 aaKnown RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 ZDHHC22Q8N966 263 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 CPEB3Q8NE35 698 aaKnown RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 OR51T1Q8NGJ9 327 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 NUDCD2Q8WVJ2 157 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 ASB13Q8WXK3 278 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 NANOS1Q8WY41 292 aaKnown RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 MS4A3Q96HJ5 214 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 GMPPAQ96IJ6 420 aaPredicted RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 TMEM246Q9BRR3 403 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 BANF2Q9H503 90 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 OPA3Q9H6K4 179 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 DLL4Q9NR61 685 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 MGAT4CQ9UBM8 478 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 KCNN3Q9UGI6 736 aa10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 ELF5Q9UKW6 265 aaPredicted RBP10.99□□□□□ -0.65
AC055717.2-201ENST00000561864 SERPINE3A8MV23 424 aa10.98□□□□□ -0.65
AC055717.2-201ENST00000561864 SMLR1H3BR10 107 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms