RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 HIST1H1TP22492 207 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-206ENST00000561781 AADACL3Q5VUY0 350 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 FAM219AQ8IW50 185 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 OR52E1Q8NGJ3 308 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 TMEM18Q96B42 140 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF681Q96N22 645 aa16.56■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF587Q96SQ5 575 aaPredicted RBP16.56■□□□□ 0.24
RAB40C-206ENST00000561781 SPTBP11277 2137 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 PDGFBP01127 241 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-206ENST00000561781 GIMD1P0DJR0 217 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 FGF5P12034 268 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 GABRA4P48169 554 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 CARD18P57730 90 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 SMIM15Q7Z3B0 74 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 HOGA1Q86XE5 327 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 FAM185AQ8N0U4 392 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 MARCH1Q8TCQ1 289 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 WFIKKN1Q96NZ8 548 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 RARRES2Q99969 163 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 GLRX2Q9NS18 164 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 RXFP3Q9NSD7 469 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 TMEM242Q9NWH2 141 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 PADI1Q9ULC6 663 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 CYP8B1Q9UNU6 501 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 RBFOX3A6NFN3 312 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 ELOA3DA6NLF2 546 aaPredicted RBP16.55■□□□□ 0.24
RAB40C-206ENST00000561781 OR4C45A6NMZ5 311 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 PPP5D1E7EU14 171 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 K7ESM1 405 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 CLEC3AO75596 197 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 SLC35G6P0C7Q6 338 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 SRFP11831 508 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 NID1P14543 1247 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 FHITP49789 147 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 MMP16P51512 607 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 RND2P52198 227 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 POLR2HP52434 150 aaKnown RBP16.55■□□□□ 0.24
RAB40C-206ENST00000561781 CSNK1G2P78368 415 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 ITPRIPL2Q3MIP1 535 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 ELOA3BQ3SY89 546 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 ELOA3Q8NG57 546 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 RELTQ969Z4 430 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 COL26A1Q96A83 441 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 GSKIPQ9P0R6 139 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 SLC25A13Q9UJS0 675 aa16.55■□□□□ 0.24
RAB40C-206ENST00000561781 TRBV24-1A0A075B6N3 115 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 H0YL77 283 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 HCRTR2O43614 444 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 PLRG1O43660 514 aaKnown RBP16.54■□□□□ 0.24
RAB40C-206ENST00000561781 NUDT21O43809 227 aaKnown RBP16.54■□□□□ 0.24
RAB40C-206ENST00000561781 NDUFB2O95178 105 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 HRH1P35367 487 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 PDGFRLQ15198 375 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 CLEC18BQ6UXF7 455 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 TRAPPC6BQ86SZ2 158 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 EXD3Q8N9H8 876 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 CMBLQ96DG6 245 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 GINS3Q9BRX5 216 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 SMIM3Q9BZL3 60 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 FBXO34Q9NWN3 711 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF780BQ9Y6R6 833 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 HSBP1L1C9JCN9 74 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 SERPINA2P20848 420 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 CTHP32929 405 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 RPL4P36578 427 aaKnown RBP16.54■□□□□ 0.24
RAB40C-206ENST00000561781 SLC9A3R2Q15599 337 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 TMEM215Q68D42 235 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 ADGRE4PQ86SQ3 457 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 OR4X1Q8NH49 305 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 RASD2Q96D21 266 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 FOXQ1Q9C009 403 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 CAPN10Q9HC96 672 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 RAB22AQ9UL26 194 aa16.54■□□□□ 0.24
RAB40C-206ENST00000561781 C20orf202A1L168 122 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 FITM1A5D6W6 292 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 DBIP07108 87 aaKnown RBP16.53■□□□□ 0.24
RAB40C-206ENST00000561781 CHRM2P08172 466 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 ERGP11308 486 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF708P17019 499 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 LINC01590Q5TEZ4 76 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 ZNF619Q8N2I2 560 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 RCBTB1Q8NDN9 531 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 AQP3Q92482 292 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 LMLNQ96KR4 655 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 ALG12Q9BV10 488 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 COLEC10Q9Y6Z7 277 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 TECTAO75443 2155 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 COL4A2P08572 1712 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 EML5Q05BV3 1969 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 A0A1W2PPV9 198 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 K7EP13 123 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 RPS4Y1P22090 263 aaKnown RBP16.53■□□□□ 0.24
RAB40C-206ENST00000561781 SEC13P55735 322 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 COL5A1-AS1Q5SY13 56 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 MFSD9Q8NBP5 474 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 PLPP7Q8NBV4 271 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 MRGPRDQ8TDS7 321 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 TSEN15Q8WW01 171 aaKnown RBP16.53■□□□□ 0.24
RAB40C-206ENST00000561781 MS4A6EQ96DS6 147 aa16.53■□□□□ 0.24
RAB40C-206ENST00000561781 ADAD1Q96M93 576 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms