RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 DUX4L4P0CJ87 422 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L5P0CJ88 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L6P0CJ89 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L7P0CJ90 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 BPIFB3P59826 476 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PSMA6P60900 246 aaKnown RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 ARF6P62330 175 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 IL5RAQ01344 420 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 BNIP1Q12981 228 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PRDX4Q13162 271 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PTGES3Q15185 160 aaKnown RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 SNCBQ16143 134 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 FAM76BQ5HYJ3 339 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 WDR38Q5JTN6 314 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 RUSC1-AS1Q66K80 236 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4L9Q6RFH8 374 aaPredicted RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 KRT77Q7Z794 578 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 FGFRL1Q8N441 504 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 FTMTQ8N4E7 242 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DNAJC9Q8WXX5 260 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 ST8SIA4Q92187 359 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PIGCQ92535 297 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 RPL3LQ92901 407 aaKnown RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 WDFY2Q96P53 400 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 TBX15Q96SF7 602 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 PKP2Q99959 881 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 MICU1Q9BPX6 476 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 ZNF747Q9BV97 191 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 YIPF3Q9GZM5 350 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 FGF23Q9GZV9 251 aaPredicted RBP8.51□□□□□ -1.05
CLK3-205ENST00000561673 PRDM13Q9H4Q3 707 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 NIPAL2Q9H841 368 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 KIF17Q9P2E2 1029 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 DUX4Q9UBX2 424 aa8.51□□□□□ -1.05
CLK3-205ENST00000561673 TMEM269A0A1B0GVZ9 245 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 ACOD1A6NK06 481 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 PRR32B1ATL7 298 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 SRRM5B3KS81 715 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 P2RY10O00398 339 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 HOXA3O43365 443 aaPredicted RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 PRKYO43930 277 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 MITFO75030 526 aaPredicted RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 GMFBP60983 142 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 ESRRGP62508 458 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 EFNB1P98172 346 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 C11orf91Q3C1V1 193 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 METTL11BQ5VVY1 283 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 C16orf87Q6PH81 154 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 KCTD18Q6PI47 426 aaPredicted RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 DEGS2Q6QHC5 323 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 Q6YL49 198 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 KCTD8Q6ZWB6 473 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 BCDIN3DQ7Z5W3 292 aaKnown RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 FAM216BQ8N7L0 139 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 SCCPDHQ8NBX0 429 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 OR5T2Q8NGG2 359 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 OR5K1Q8NHB7 308 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 SGMS2Q8NHU3 365 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 HPSE2Q8WWQ2 592 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 C12orf43Q96C57 262 aaKnown RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 RNF170Q96K19 258 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 RTL8AQ9BWD3 113 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 MROQ9BYG7 248 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 SIRPDQ9H106 197 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 WDR13Q9H1Z4 485 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 CNTD2Q9H8S5 307 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 ABCB9Q9NP78 766 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 FAM206AQ9NX38 181 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 HAO2Q9NYQ3 351 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 RPUSD1Q9UJJ7 312 aaKnown RBP8.5□□□□□ -1.05
CLK3-205ENST00000561673 ZNF391Q9UJN7 358 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 COPS3Q9UNS2 423 aa8.5□□□□□ -1.05
CLK3-205ENST00000561673 IGHV1-69DA0A0B4J2H0 117 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 A0A0U1RQV5 110 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 TMEM210A6NLX4 147 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 G3V2T6 193 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 M0R129 80 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 AKR7A2O43488 359 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 IGHV1-69P01742 117 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 AMY2BP19961 511 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 EPHA2P29317 976 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 DCTDP32321 178 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 TGM4P49221 684 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 GPM6AP51674 278 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ROM1Q03395 351 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 IKZF1Q13422 519 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 PDCD1Q15116 288 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ATP6AP1Q15904 470 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 CEP78Q5JTW2 689 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ATPAF1Q5TC12 328 aaPredicted RBP8.49□□□□□ -1.05
CLK3-205ENST00000561673 STUMQ69YW2 141 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 MEPCEQ7L2J0 689 aaKnown RBP8.49□□□□□ -1.05
CLK3-205ENST00000561673 KRT74Q7RTS7 529 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 SLC36A1Q7Z2H8 476 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ZDHHC23Q8IYP9 409 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 ZNF679Q8IYX0 411 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 LY6G5BQ8NDX9 201 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 OR10Z1Q8NGY1 313 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 FAM81AQ8TBF8 368 aa8.49□□□□□ -1.05
CLK3-205ENST00000561673 OR51E1Q8TCB6 317 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms