RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 SLC16A12Q6ZSM3 486 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 GDPD3Q7L5L3 318 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 OFCC1Q8IZS5 231 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 KLHL36Q8N4N3 616 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 CLDN22Q8N7P3 220 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 SLC37A3Q8NCC5 494 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 C22orf15Q8WYQ4 148 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 NSMAFQ92636 917 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 FCGR1BQ92637 280 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 RBPMSQ93062 196 aaKnown RBP7.05□□□□□ -1.28
PALB2-202ENST00000561514 UPRTQ96BW1 309 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 HAVCR1Q96D42 359 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 BPIFA2Q96DR5 249 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 PRRC1Q96M27 445 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 ZNF583Q96ND8 569 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 RBP7Q96R05 134 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 SLIRPQ9GZT3 109 aaKnown RBP7.05□□□□□ -1.28
PALB2-202ENST00000561514 SLC22A4Q9H015 551 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 POFUT1Q9H488 388 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 MSL2Q9HCI7 577 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 IL20RAQ9UHF4 553 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 PPIAL4AQ9Y536 164 aa7.05□□□□□ -1.28
PALB2-202ENST00000561514 WNK1Q9H4A3 2382 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 LOC100653049A0A140TA62 436 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 MEIOCA2RUB1 952 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 CEACAM18A8MTB9 384 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 TMEM178BH3BS89 294 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 SURF4O15260 269 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 TBX1O43435 398 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 TIMM8AO60220 97 aaPredicted RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 KRT34O76011 436 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 ABHD16AO95870 558 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 WNT2P09544 360 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 CD80P33681 288 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.04□□□□□ -1.28
PALB2-202ENST00000561514 ST3GAL3Q11203 375 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 HNRNPA0Q13151 305 aaKnown RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 MAB21L1Q13394 359 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 MICAQ29983 383 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 PDLIM3Q53GG5 364 aaPredicted RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 LEG1Q6P5S2 330 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 FBXW12Q6X9E4 464 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 RBMS3Q6XE24 437 aaKnown RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 FAM122BQ7Z309 247 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 THAP5Q7Z6K1 395 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 BCL6BQ8N143 479 aaPredicted RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 MUC20Q8N307 709 aaPredicted RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 BPIFB6Q8NFQ5 453 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 OR1M1Q8NGA1 313 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 RORBQ92753 470 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 C7orf34Q96L11 122 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 DCLRE1CQ96SD1 692 aaKnown RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 CDADC1Q9BWV3 514 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 NAA50Q9GZZ1 169 aaKnown RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 RANBP3Q9H6Z4 567 aaPredicted RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 UNKLQ9H9P5 680 aaKnown RBP7.04□□□□□ -1.28
PALB2-202ENST00000561514 DNAJB9Q9UBS3 223 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 EGFL7Q9UHF1 273 aa7.04□□□□□ -1.28
PALB2-202ENST00000561514 TEX13CA0A0J9YWL9 993 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 METTL15A6NJ78 407 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 BBIP1A8MTZ0 92 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 FAM220BPB1ANY3 271 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 FFAR1O14842 300 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 SBK2P0C263 348 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 IFI30P13284 250 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 TNFSF4P23510 183 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 CRHBPP24387 322 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 NOS3P29474 1203 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 KDELR2P33947 212 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 SOX6P35712 828 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 OR1E2P47887 323 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 RGS6P49758 472 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 ERFP50548 548 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 CTXN1P60606 82 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 PSME3P61289 254 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 LSM6P62312 80 aaKnown RBP7.03□□□□□ -1.28
PALB2-202ENST00000561514 ADARB1P78563 741 aaKnown RBP7.03□□□□□ -1.28
PALB2-202ENST00000561514 AQP6Q13520 282 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 KCNMB1Q16558 191 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 KRTAP27-1Q3LI81 207 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 RNF212Q495C1 297 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 CYBRD1Q53TN4 286 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 MESTQ5EB52 335 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 TEX261Q6UWH6 196 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 TREML4Q6UXN2 200 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 CFAP77Q6ZQR2 320 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 ZDHHC13Q8IUH4 622 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 NRMQ8IXM6 262 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 NKAIN3Q8N8D7 197 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 OR8H1Q8NGG4 311 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 NDNFQ8TB73 568 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 ITLN1Q8WWA0 313 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 SLC25A28Q96A46 364 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 OR2V2Q96R30 315 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 GPX7Q96SL4 187 aaPredicted RBP7.03□□□□□ -1.28
PALB2-202ENST00000561514 MRI1Q9BV20 369 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 C1QTNF5Q9BXJ0 243 aa7.03□□□□□ -1.28
PALB2-202ENST00000561514 GCM1Q9NP62 436 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms