RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 ZBP1Q9H171 429 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 NEUROG2Q9H2A3 272 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 LHX5Q9H2C1 402 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 FAM96AQ9H5X1 160 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 EDA2RQ9HAV5 297 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 MIEF1Q9NQG6 463 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C19orf12Q9NSK7 152 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 DDX19AQ9NUU7 478 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 PARVAQ9NVD7 372 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 AIG1Q9NVV5 245 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 DMAC2Q9NW81 257 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GLTPQ9NZD2 209 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 TMEM9Q9P0T7 183 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 VPS29Q9UBQ0 182 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 C14orf166Q9Y224 244 aaKnown RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 ST3GAL6Q9Y274 331 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 UGT2A1Q9Y4X1 527 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 COX11Q9Y6N1 276 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 ZNF608Q9ULD9 1512 aaPredicted RBP1.64□□□□□ -2.15
RTF1-207ENST00000561076 SMCHD1A6NHR9 2005 aa1.64□□□□□ -2.15
RTF1-207ENST00000561076 GAPVD1Q14C86 1478 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 POLR2AP24928 1970 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 IGKV1D-8A0A087WSZ0 117 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TRAV19A0A0A6YYK7 116 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TRAV8-2A0A0B4J237 113 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TRAV8-6A0A0B4J262 113 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TINCRA0A1B0GVN0 87 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 RPL37AP8A6NKH3 93 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 NCBP2LA6PVI3 153 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 CEACAM18A8MTB9 384 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ERVV-1B6SEH8 477 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 C21orf140B9A014 251 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 G3V2L1 256 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 H7C1H1 209 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 K7EMT4 169 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 K7EQG2 157 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 UPK2O00526 184 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ACOT8O14734 319 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CDIPTO14735 213 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 FGF16O43320 207 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 SYNGR1O43759 233 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LYPLA1O75608 230 aaPredicted RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 RP2O75695 350 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 OR2B3O76000 313 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 SLC22A5O76082 557 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CNIH1O95406 144 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 BRI3O95415 125 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CTDNEP1O95476 244 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 MOSP00540 346 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CD8AP01732 235 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CD48P09326 243 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PGA4P0DJD7 388 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PGA3P0DJD8 388 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 HIST1H1EP10412 219 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 FOLR1P15328 257 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 IGLL1P15814 213 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 GABRG2P18507 467 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ME2P23368 584 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 GDF1P27539 372 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LOXP28300 417 aaPredicted RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 RPL12P30050 165 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 ADORA1P30542 326 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ALDH3A1P30838 453 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CCKARP32238 428 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 APLNRP35414 380 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 DRD3P35462 400 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 NR4A2P43354 598 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PPOXP50336 477 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LMO4P61968 165 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LSM6P62312 80 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 RPS21P63220 83 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 HBG1P69891 147 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 HBG2P69892 147 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 SLC35A2P78381 396 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 IFITM3Q01628 133 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 SMAGPQ0VAQ4 97 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PPP1R1AQ13522 171 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 GINS1Q14691 196 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 GPNMBQ14956 572 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PTGES3Q15185 160 aaKnown RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 OR1Q1Q15612 314 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ALX1Q15699 326 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 NSDHLQ15738 373 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TOMM34Q15785 309 aaPredicted RBP1.63□□□□□ -2.15
RTF1-207ENST00000561076 BATFQ16520 125 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 PRSS8Q16651 343 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 HIST3H3Q16695 136 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ARHGAP11BQ3KRB8 267 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 TMEM30BQ3MIR4 351 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CHRFAM7AQ494W8 412 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ZNF876PQ49A33 203 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LIN52Q52LA3 116 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 ATP6AP1LQ52LC2 224 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 LRRC10Q5BKY1 277 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 CLEC12AQ5QGZ9 265 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 VAX1Q5SQQ9 334 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 C1orf100Q5SVJ3 147 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 STPG1Q5TH74 334 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 C9orf57Q5W0N0 161 aa1.63□□□□□ -2.15
RTF1-207ENST00000561076 IGFL4Q6B9Z1 124 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms