RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 TEX30Q5JUR7 227 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 FTMTQ8N4E7 242 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 OR2T4Q8NH00 348 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 OR5K1Q8NHB7 308 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 SLAMF6Q96DU3 332 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 C7orf34Q96L11 122 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 WDR13Q9H1Z4 485 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 FN3KQ9H479 309 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 ABCB9Q9NP78 766 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 LRP12Q9Y561 859 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 MPC1Q9Y5U8 109 aa15.01□□□□□ -0.01
TPM1-226ENST00000560959 hCG_38984A0A1B0GV85 526 aa15□□□□□ -0.01
TPM1-226ENST00000560959 ANXA2P2A6NMY6 339 aa15□□□□□ -0.01
TPM1-226ENST00000560959 DUS4LO95620 317 aaKnown RBP15□□□□□ -0.01
TPM1-226ENST00000560959 APOC1P02654 83 aa15□□□□□ -0.01
TPM1-226ENST00000560959 BMXP51813 675 aa15□□□□□ -0.01
TPM1-226ENST00000560959 SMIM11AP58511 58 aa15□□□□□ -0.01
TPM1-226ENST00000560959 GRB2P62993 217 aaKnown RBP15□□□□□ -0.01
TPM1-226ENST00000560959 KHDRBS1Q07666 443 aaKnown RBP eCLIP15□□□□□ -0.01
TPM1-226ENST00000560959 TIGD6Q17RP2 521 aa15□□□□□ -0.01
TPM1-226ENST00000560959 CPLX4Q7Z7G2 160 aa15□□□□□ -0.01
TPM1-226ENST00000560959 PROKR2Q8NFJ6 384 aa15□□□□□ -0.01
TPM1-226ENST00000560959 REEP6Q96HR9 211 aa15□□□□□ -0.01
TPM1-226ENST00000560959 NKX3-1Q99801 234 aaPredicted RBP15□□□□□ -0.01
TPM1-226ENST00000560959 RTL8AQ9BWD3 113 aa15□□□□□ -0.01
TPM1-226ENST00000560959 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
TPM1-226ENST00000560959 SNTG1Q9NSN8 517 aa15□□□□□ -0.01
TPM1-226ENST00000560959 CENPMQ9NSP4 180 aa15□□□□□ -0.01
TPM1-226ENST00000560959 GMPR2Q9P2T1 348 aaKnown RBP15□□□□□ -0.01
TPM1-226ENST00000560959 NLKQ9UBE8 527 aa15□□□□□ -0.01
TPM1-226ENST00000560959 N6AMT1Q9Y5N5 214 aa15□□□□□ -0.01
TPM1-226ENST00000560959 A0A1W2PPH5 198 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 FAM90A8PA6NJQ4 464 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 OR2AT4A6NND4 320 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 ZNF878C9JN71 531 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 GSK3AP49840 483 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 LGALS4P56470 323 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 KRT72Q14CN4 511 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 CNN3Q15417 329 aaKnown RBP14.99□□□□□ -0.01
TPM1-226ENST00000560959 DEFB121Q5J5C9 76 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 ZBTB37Q5TC79 503 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 OR52H1Q8NGJ2 320 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 OR52J3Q8NH60 311 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 HOPXQ9BPY8 73 aaPredicted RBP14.99□□□□□ -0.01
TPM1-226ENST00000560959 PAPOLGQ9BWT3 736 aaKnown RBP14.99□□□□□ -0.01
TPM1-226ENST00000560959 PITPNC1Q9UKF7 332 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 TCF19Q9Y242 345 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 RHBDD3Q9Y3P4 386 aa14.99□□□□□ -0.01
TPM1-226ENST00000560959 TVP23AA6NH52 213 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 NDUFAB1O14561 156 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 SLC22A2O15244 555 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 TBX1O43435 398 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 PEX14O75381 377 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 PSKH1P11801 424 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 PYCR1P32322 319 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 IFNGR2P38484 337 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 ENTPD1P49961 510 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 SLC35A2P78381 396 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 CD83Q01151 205 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 HABP2Q14520 560 aaPredicted RBP14.98□□□□□ -0.01
TPM1-226ENST00000560959 PRSS45Q7RTY3 260 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 MKXQ8IYA7 352 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 C11orf42Q8N5U0 333 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 FAM162AQ96A26 154 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 RCC1LQ96I51 464 aaKnown RBP14.98□□□□□ -0.01
TPM1-226ENST00000560959 RGCCQ9H4X1 137 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 PPP1R3EQ9H7J1 279 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 COMMD3-BMI1R4GMX3 469 aa14.98□□□□□ -0.01
TPM1-226ENST00000560959 hCG_1809904A0A1W2PP81 198 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 A0A1W2PPE2 198 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 A0A1W2PR64 198 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 A0A1W2PRV1 198 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 ZNF593O00488 134 aaPredicted RBP14.97□□□□□ -0.01
TPM1-226ENST00000560959 AKR7A2O43488 359 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 ALDOBP05062 364 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 FMO3P31513 532 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 DCTDP32321 178 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 GSSP48637 474 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 CX3CR1P49238 355 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 KLHL12Q53G59 568 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 SLC35F1Q5T1Q4 408 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 CCBE1Q6UXH8 406 aaPredicted RBP14.97□□□□□ -0.01
TPM1-226ENST00000560959 ZNRF1Q8ND25 227 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 ZNRF4Q8WWF5 429 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 OR5P3Q8WZ94 311 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 RPL3LQ92901 407 aaKnown RBP14.97□□□□□ -0.01
TPM1-226ENST00000560959 RCN3Q96D15 328 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 SDSLQ96GA7 329 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 B9D2Q9BPU9 175 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 ZNF222Q9UK12 451 aa14.97□□□□□ -0.01
TPM1-226ENST00000560959 IGKV1D-17A0A075B6S4 117 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 A6NDX4 124 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 NME4O00746 187 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 CST4P01036 141 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 ANXA2P07355 339 aaKnown RBP14.96□□□□□ -0.01
TPM1-226ENST00000560959 SPARCP09486 303 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 PSG2P11465 335 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 PAX6P26367 422 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 GMFBP60983 142 aa14.96□□□□□ -0.01
TPM1-226ENST00000560959 CD69Q07108 199 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms