RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 ZNF426Q9BUY5 554 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 RERGLQ9H628 205 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 MEPEQ9NQ76 525 aaPredicted RBP7.6□□□□□ -1.19
HERC1-210ENST00000560897 SNTG1Q9NSN8 517 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 ZFP57Q9NU63 452 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 VAPAQ9P0L0 249 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 RPS6KA6Q9UK32 745 aa7.6□□□□□ -1.19
HERC1-210ENST00000560897 TEX13CA0A0J9YWL9 993 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 LDLRAD4O15165 306 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 CTLA4P16410 223 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 GPX2P18283 190 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 RBM34P42696 430 aaKnown RBP7.59□□□□□ -1.19
HERC1-210ENST00000560897 DYNLT3P51808 116 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 SLC7A2P52569 658 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 CAPZA1P52907 286 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 DGUOKQ16854 277 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 SAMD4BQ5PRF9 694 aaKnown RBP7.59□□□□□ -1.19
HERC1-210ENST00000560897 FAM27D1Q5T7N8 215 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 OTPQ5XKR4 325 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 DLEU7Q6UYE1 221 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.59□□□□□ -1.19
HERC1-210ENST00000560897 PGAM4Q8N0Y7 254 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 DYNAPQ8N1N2 210 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 TMEM185AQ8NFB2 350 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 OR2T12Q8NG77 320 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 OR5K1Q8NHB7 308 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 LRGUKQ96M69 825 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 BTBD10Q9BSF8 475 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 ELL3Q9HB65 397 aaPredicted RBP7.59□□□□□ -1.19
HERC1-210ENST00000560897 HAO2Q9NYQ3 351 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 HECTD4Q9Y4D8 3996 aa7.59□□□□□ -1.19
HERC1-210ENST00000560897 FAM90A8PA6NJQ4 464 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 ANKRD30BLA7E2S9 258 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 CCL24O00175 119 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 SIGLEC5O15389 551 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 TIPRLO75663 272 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 RHBDL1O75783 438 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 CIB2O75838 187 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 LYPD3O95274 346 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 LY6G6CO95867 125 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 IFNA6P05013 189 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 ATF4P18848 351 aaPredicted RBP7.58□□□□□ -1.2
HERC1-210ENST00000560897 SDHAP31040 664 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 IFNA8P32881 189 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 GNALP38405 381 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 GABRA2P47869 451 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 CENPAP49450 140 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 SLC25A1P53007 311 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 SPIBQ01892 262 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 LIPEQ05469 1076 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 ZNF260Q3ZCT1 412 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 PGM2L1Q6PCE3 622 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 WDR82Q6UXN9 313 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 ZNF782Q6ZMW2 699 aaPredicted RBP7.58□□□□□ -1.2
HERC1-210ENST00000560897 ZNF788Q6ZQV5 615 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 C18orf65Q6ZTR6 163 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 PATL1Q86TB9 770 aaKnown RBP7.58□□□□□ -1.2
HERC1-210ENST00000560897 ZNF695Q8IW36 515 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 GLB1L2Q8IW92 636 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 OR13D1Q8NGV5 346 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 TMEM239Q8WW34 195 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 RASSF5Q8WWW0 418 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 LZICQ8WZA0 190 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 FAM162AQ96A26 154 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 SEH1LQ96EE3 360 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 GAFA1Q96PS6 74 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 DUX3Q96PT4 197 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 TM2D3Q9BRN9 247 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 THTPAQ9BU02 230 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 C1orf21Q9H246 121 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 SLC25A37Q9NYZ2 338 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 USE1Q9NZ43 259 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 GRHPRQ9UBQ7 328 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 MED31Q9Y3C7 131 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 LYVE1Q9Y5Y7 322 aa7.58□□□□□ -1.2
HERC1-210ENST00000560897 KHDRBS3O75525 346 aaKnown RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 DNAJC8O75937 253 aaPredicted RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 TSPAN19P0C672 248 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 ACSM4P0C7M7 580 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 PGA5P0DJD9 388 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 AMY2BP19961 511 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 TPTEP56180 551 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 TAS2R41P59536 307 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 CSNK2BP67870 215 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 BNIP1Q12981 228 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 DYNC1I2Q13409 638 aaKnown RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 VMACQ2NL98 169 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 SPATS1Q496A3 300 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 FKBP9P1Q75LS8 142 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 ZNF329Q86UD4 541 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 RBM45Q8IUH3 476 aaKnown RBP7.57□□□□□ -1.2
HERC1-210ENST00000560897 SLC15A3Q8IY34 581 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 C10orf67Q8IYJ2 551 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 OR1M1Q8NGA1 313 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 OR8U1Q8NH10 309 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 TMEM255BQ8WV15 326 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 LIPHQ8WWY8 451 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 LINC00476Q8WZB0 136 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 RNFT2Q96EX2 444 aa7.57□□□□□ -1.2
HERC1-210ENST00000560897 PITX2Q99697 317 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms