RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 MRPL22Q9NWU5 206 aaKnown RBP7.82□□□□□ -1.16
SMAD3-215ENST00000560424 B3GNT2Q9NY97 397 aa7.82□□□□□ -1.16
SMAD3-215ENST00000560424 C1RLQ9NZP8 487 aa7.82□□□□□ -1.16
SMAD3-215ENST00000560424 INSIG2Q9Y5U4 225 aa7.82□□□□□ -1.16
SMAD3-215ENST00000560424 C5orf63A6NC05 138 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 CCDC160A6NGH7 325 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 SPRY3O43610 288 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 SELENOFO60613 162 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 ABHD16AO95870 558 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 HSMCR30P0CW71 290 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 OR8G3PP0DMU2 310 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 LAP3P28838 519 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 GABRA5P31644 462 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 TGM4P49221 684 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 ENTPD1P49961 510 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 ZNF81P51508 661 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 CLRN1P58418 232 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 LSM6P62312 80 aaKnown RBP7.81□□□□□ -1.16
SMAD3-215ENST00000560424 DYNC1I2Q13409 638 aaKnown RBP7.81□□□□□ -1.16
SMAD3-215ENST00000560424 TRAM1Q15629 374 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 CARD17Q5XLA6 110 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 PLEKHG7Q6ZR37 379 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 LINC00299Q6ZSB3 139 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 C20orf196Q8IYI0 205 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 OR51L1Q8NGJ5 315 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 SPRYD4Q8WW59 207 aaPredicted RBP7.81□□□□□ -1.16
SMAD3-215ENST00000560424 GATAD2BQ8WXI9 593 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 UFD1Q92890 307 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 MCHR2Q969V1 340 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 DCLRE1CQ96SD1 692 aaKnown RBP7.81□□□□□ -1.16
SMAD3-215ENST00000560424 WACQ9BTA9 647 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 EMC6Q9BV81 110 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 GLTPQ9NZD2 209 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 COPS3Q9UNS2 423 aa7.81□□□□□ -1.16
SMAD3-215ENST00000560424 SF3B6Q9Y3B4 125 aaKnown RBP7.81□□□□□ -1.16
SMAD3-215ENST00000560424 IGLV3-9A0A075B6K5 115 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 IGKV1D-43A0A0B4J1Z2 117 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 TRAPPC2LH3BP13 241 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 OGG1O15527 345 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 ZNF254O75437 659 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 LALBAP00709 142 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 MRPL3P09001 348 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 ZNF250P15622 560 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 CALRP27797 417 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 FGF9P31371 208 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 DCTDP32321 178 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 NAA10P41227 235 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 CSNK1A1P48729 337 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 RPL15P61313 204 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 RELBQ01201 579 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 TBC1D28Q2M2D7 210 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 DEFB112Q30KQ8 113 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 DMKNQ6E0U4 476 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 SLC18B1Q6NT16 456 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 FDX2Q6P4F2 183 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 RPL22L1Q6P5R6 122 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 KCTD18Q6PI47 426 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 LRFN4Q6PJG9 635 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 LRRN1Q6UXK5 716 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 SSX6Q7RTT6 188 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 MS4A15Q8N5U1 240 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 SLC30A7Q8NEW0 376 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 OR6N1Q8NGY5 312 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 OR6N2Q8NGY6 317 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 PPP1R14AQ96A00 147 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 C4orf36Q96KX1 117 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 FOXB1Q99853 325 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 ULBP2Q9BZM5 246 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 CHIAQ9BZP6 476 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 BCL2L14Q9BZR8 327 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 NAA50Q9GZZ1 169 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 RNF121Q9H920 327 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 ISG20L2Q9H9L3 353 aaKnown RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 NOX4Q9NPH5 578 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 CYB5R1Q9UHQ9 305 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 LAMP5Q9UJQ1 280 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 STUB1Q9UNE7 303 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 COA3Q9Y2R0 106 aaPredicted RBP7.8□□□□□ -1.16
SMAD3-215ENST00000560424 NPTNQ9Y639 398 aa7.8□□□□□ -1.16
SMAD3-215ENST00000560424 TRDV1A0A1B0GX56 115 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 TVP23AA6NH52 213 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 METTL15A6NJ78 407 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 ZNF593O00488 134 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-215ENST00000560424 DHHO43323 396 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 AIREO43918 545 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 SC5DO75845 299 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 CLPXO76031 633 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 PLATP00750 562 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 HLA-DPB1P04440 258 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 SERPINA5P05154 406 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 QDPRP09417 244 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 ZNF823P16415 610 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 GADD45AP24522 165 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 GBX2P52951 348 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-215ENST00000560424 OR12D2P58182 307 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 KRTAP10-3P60369 221 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 MRPS34P82930 218 aaKnown RBP7.79□□□□□ -1.16
SMAD3-215ENST00000560424 FMODQ06828 376 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 AQP6Q13520 282 aa7.79□□□□□ -1.16
SMAD3-215ENST00000560424 CDK5R1Q15078 307 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms