RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 ZIC4Q8N9L1 334 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 NAT6Q93015 286 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 FAHD2AQ96GK7 314 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 URM1Q9BTM9 101 aaKnown RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 ZNF700Q9H0M5 742 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 WDR54Q9H977 334 aa8.81□□□□□ -1
LRRC28-216ENST00000559819 CHMP1AQ9HD42 196 aaPredicted RBP8.81□□□□□ -1
LRRC28-216ENST00000559819 SDK2Q58EX2 2172 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 IGKV1D-8A0A087WSZ0 117 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 FOXI3A8MTJ6 420 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 ATF4P18848 351 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 GLRA1P23415 457 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 GUCA1AP43080 201 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 SUPT4H1P63272 117 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 CSNK2A1P68400 391 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 C10orf128Q5T292 105 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 MOB3CQ70IA8 216 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 TMEM156Q8N614 296 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PNLDC1Q8NA58 520 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 CSNK2A3Q8NEV1 391 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 GJC3Q8NFK1 279 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 OR2AE1Q8NHA4 323 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 FBXO17Q96EF6 278 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 RRNAD1Q96FB5 475 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 ARPC5LQ9BPX5 153 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 RTBDNQ9BSG5 229 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 HDHD3Q9BSH5 251 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 PECRQ9BY49 303 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PRDM6Q9NQX0 595 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 GPR173Q9NS66 373 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 ZNF581Q9P0T4 197 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 FLVCR1Q9Y5Y0 555 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 V9GYS6 101 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 NCOA6Q14686 2063 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 A0A087WZY1 265 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 M0R135 149 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 DHRS3O75911 302 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 SFT2D2O95562 160 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 APOC3P02656 99 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 KLK3P07288 261 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 PATE4P0C8F1 98 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PRKACBP22694 351 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PSMB6P28072 239 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 NTF4P34130 210 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 THBS4P35443 961 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 SNU13P55769 128 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 DSCR4P56555 118 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 RPS18P62269 152 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 ECH1Q13011 328 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PNLIPRP3Q17RR3 467 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 AADACL3Q5VUY0 350 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 YRDCQ86U90 279 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 SPERTQ8NA61 448 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 INO80EQ8NBZ0 244 aaPredicted RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 ZNF799Q96GE5 643 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 OCSTAMPQ9BR26 566 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 RNF126Q9BV68 326 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 ULBP2Q9BZM5 246 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 PLEK2Q9NYT0 353 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 EHFQ9NZC4 300 aa8.8□□□□□ -1
LRRC28-216ENST00000559819 NXT1Q9UKK6 140 aaKnown RBP8.8□□□□□ -1
LRRC28-216ENST00000559819 PLATP00750 562 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 GABRR1P24046 479 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 CTSSP25774 331 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 OR3A2P47893 321 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 TAS2R31P59538 309 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 PPIAP62937 165 aaKnown RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 IL11RAQ14626 422 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 TMEM128Q5BJH2 165 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 C6orf201Q7Z4U5 140 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 RPS19BP1Q86WX3 136 aaKnown RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 NAXEQ8NCW5 288 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 PAQR8Q8TEZ7 354 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 HPF1Q9NWY4 346 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 TAS2R3Q9NYW6 316 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 OSGIN2Q9Y236 505 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 CNTRLQ7Z7A1 2325 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 NSG1A0A0A6YYJ2 146 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 A0A0B4J2A0 478 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 MSGN1A6NI15 193 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 MSTNO14793 375 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 ANGPTL7O43827 346 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 NAT2P11245 290 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 HGFACQ04756 655 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 SNTB1Q13884 538 aaKnown RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 EXT1Q16394 746 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 FOXL2NBQ6ZUU3 175 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 FAM89BQ8N5H3 189 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 ARRDC1Q8N5I2 433 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 EIF4E3Q8N5X7 224 aaKnown RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 ZSCAN4Q8NAM6 433 aaPredicted RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 TMEM185AQ8NFB2 350 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 BPIFCQ8NFQ6 507 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 SGK3Q96BR1 496 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 CDC6Q99741 560 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 PIGQQ9BRB3 760 aa8.79□□□□□ -1
LRRC28-216ENST00000559819 NAA11Q9BSU3 229 aaPredicted RBP8.79□□□□□ -1
LRRC28-216ENST00000559819 SH2D2AQ9NP31 389 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms