RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 FTMTQ8N4E7 242 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 BHLHE23Q8NDY6 225 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 OR13F1Q8NGS4 319 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 OR5P3Q8WZ94 311 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 PHYHIPQ92561 330 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 THRSPQ92748 146 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 NINJ1Q92982 152 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 YIPF6Q96EC8 236 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 CACNG6Q9BXT2 260 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 TLNRD1Q9H1K6 362 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 PPIL3Q9H2H8 161 aaKnown RBP12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 ABCB9Q9NP78 766 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 TMEM100Q9NV29 134 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 IL19Q9UHD0 177 aa12.57□□□□□ -0.4
SNRPA1-207ENST00000559309 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 TRDV1A0A1B0GX56 115 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 A0A1W2PPW3 197 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 ZNF879B4DU55 563 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 GATBO75879 557 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 NCR1O76036 304 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 UCHL1P09936 223 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 HSMCR30P0CW71 290 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 CA6P23280 308 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 PSMB9P28065 219 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 FGF9P31371 208 aaPredicted RBP12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 FABP5Q01469 135 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 PRDX4Q13162 271 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 INSL4Q14641 139 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 NKPD1Q17RQ9 610 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 PCGF3Q3KNV8 242 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 DNM1P46Q6ZS02 220 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 WDR86Q86TI4 376 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 ZCCHC24Q8N2G6 241 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 SPERTQ8NA61 448 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 TMEM106AQ96A25 262 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 FGGYQ96C11 551 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 SORCS2Q96PQ0 1159 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 OR14A2Q96R54 314 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 GSX2Q9BZM3 304 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 DHDHQ9UQ10 334 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 NOP16Q9Y3C1 178 aaKnown RBP12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 PMF1-BGLAPU3KQ54 211 aa12.56□□□□□ -0.4
SNRPA1-207ENST00000559309 LOC100289279A0A1B0GTE1 492 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 PLSCR5A0PG75 271 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 ANKRD61A6NGH8 418 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 ANKRD30BLA7E2S9 258 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 ZNF850A8MQ14 1090 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 HLA-DPB1P04440 258 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 OCM2P0CE71 109 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 BMP4P12644 408 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 CEACAM21Q3KPI0 293 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 ACSM3Q53FZ2 586 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 COMMD2Q86X83 199 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 SERPINA12Q8IW75 414 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 DNAAF1Q8NEP3 725 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 OR5A2Q8NGI9 324 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 OR13C3Q8NGS6 347 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 TECTBQ96PL2 329 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 CCL19Q99731 98 aa12.55□□□□□ -0.4
SNRPA1-207ENST00000559309 PQLC2LA1A4F0 135 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 H3BSH0 61 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 GABRPO00591 440 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 SERPINA3P01011 423 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 NRASP01111 189 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 THBS2P35442 1172 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 CDKN1AP38936 164 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 MRPS11P82912 194 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 TESK1Q15569 626 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 C11orf53Q8IXP5 236 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 ZDHHC23Q8IYP9 409 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 LRRC75A-AS1Q8N1F1 130 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 OR10AD1Q8NGE0 317 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 OR5D14Q8NGL3 314 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 Q8TCH9 128 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 ELMOD3Q96FG2 381 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 MEGF10Q96KG7 1140 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 ADAT1Q9BUB4 502 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 TMED9Q9BVK6 235 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 PAPOLGQ9BWT3 736 aaKnown RBP12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 ZCCHC4Q9H5U6 513 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 VCX3AQ9NNX9 186 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 FOXJ3Q9UPW0 622 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 NF1P21359 2839 aa12.54□□□□□ -0.4
SNRPA1-207ENST00000559309 IGKV1-27A0A075B6S5 117 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 TRAV8-7A0A075B6U6 113 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 A6NIN4 97 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 F5H5P2 479 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 SULT1B1O43704 296 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 NDUFS7O75251 213 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 RP2O75695 350 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 RGS9O75916 674 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 F12P00748 615 aaPredicted RBP12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 HPXP02790 462 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 ALDOBP05062 364 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 CD2P06729 351 aa12.53□□□□□ -0.4
SNRPA1-207ENST00000559309 ATF1P18846 271 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms