RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 NDUFS8O00217 210 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 TRAPPC6AO75865 159 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 TTC4O95801 387 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 APLNRP35414 380 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 NDUFAF6Q330K2 333 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 AP1ARQ63HQ0 302 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 GATSQ8NAP1 163 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 DCAKDQ8WVC6 231 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 TBL1YQ9BQ87 522 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 SIKE1Q9BRV8 207 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 MAP1LC3CQ9BXW4 147 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 TMEM100Q9NV29 134 aa6.52□□□□□ -1.37
CASC4-208ENST00000559151 AQRO60306 1485 aaKnown RBP eCLIP6.52□□□□□ -1.37
CASC4-208ENST00000559151 UPK1BO75841 260 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 SLC35A1P78382 337 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 DRAM1Q8N682 238 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 NECAP1Q8NC96 275 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 TMEM159Q96B96 161 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 EXOSC4Q9NPD3 245 aaKnown RBP6.51□□□□□ -1.37
CASC4-208ENST00000559151 RHBDL2Q9NX52 303 aa6.51□□□□□ -1.37
CASC4-208ENST00000559151 NDRG2Q9UN36 371 aaKnown RBP6.51□□□□□ -1.37
CASC4-208ENST00000559151 DOCK8Q8NF50 2099 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 GSTTP1A0A1W2PQM5 241 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 M0R1X1 148 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 CD74P04233 296 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 CCDC172P0C7W6 258 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 CXCR1P25024 350 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 INCA1Q0VD86 236 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 ST3GAL4Q11206 333 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 DUPD1Q68J44 220 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 OR51A7Q8NH64 312 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 SLC25A46Q96AG3 418 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 OR10C1Q96KK4 312 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 SPIN2AQ99865 258 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 SPIN2BQ9BPZ2 258 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 SULT4A1Q9BR01 284 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 FBXO6Q9NRD1 293 aaPredicted RBP6.5□□□□□ -1.37
CASC4-208ENST00000559151 ENOPH1Q9UHY7 261 aa6.5□□□□□ -1.37
CASC4-208ENST00000559151 FARSAQ9Y285 508 aaKnown RBP6.5□□□□□ -1.37
CASC4-208ENST00000559151 BRCA1P38398 1863 aaKnown RBP6.49□□□□□ -1.37
CASC4-208ENST00000559151 MANBAO00462 879 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 RFXANKO14593 260 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 MPZL1O95297 269 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 WISP3O95389 354 aaPredicted RBP6.49□□□□□ -1.37
CASC4-208ENST00000559151 PCK1P35558 622 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 ETV1P50549 477 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 SLC25A35Q3KQZ1 300 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 TEX30Q5JUR7 227 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 AADACL4Q5VUY2 407 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 SHISA6Q6ZSJ9 500 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 BHLHA15Q7RTS1 189 aaPredicted RBP6.49□□□□□ -1.37
CASC4-208ENST00000559151 OR10Z1Q8NGY1 313 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 CIDECQ96AQ7 238 aaPredicted RBP6.49□□□□□ -1.37
CASC4-208ENST00000559151 SFXN3Q9BWM7 321 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 ANKHQ9HCJ1 492 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 CYTL1Q9NRR1 136 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 VAX2Q9UIW0 290 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 SLIT3O75094 1523 aa6.49□□□□□ -1.37
CASC4-208ENST00000559151 C7orf66A4D0T2 115 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 LRCOL1A6NCL2 159 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 PSPHP1O15172 72 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 SPOPO43791 374 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 TPM1P09493 284 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 HTR2CP28335 458 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 GNRHRP30968 328 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 RPL31P62899 125 aaKnown RBP6.48□□□□□ -1.37
CASC4-208ENST00000559151 PITPNAQ00169 270 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 YIF1BQ5BJH7 314 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 Q6ZSR6 202 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 ING5Q8WYH8 240 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 TIMM29Q9BSF4 260 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 NUDT9Q9BW91 350 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 XKR8Q9H6D3 395 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 HEBP1Q9NRV9 189 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 V9GYY9 64 aa6.48□□□□□ -1.37
CASC4-208ENST00000559151 MOBPQ13875 183 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 PIGHQ14442 188 aaPredicted RBP6.47□□□□□ -1.37
CASC4-208ENST00000559151 GUSBP11Q6P575 273 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 ZNF880Q6PDB4 577 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 OR5T1Q8NG75 326 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 OR1L1Q8NH94 360 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 ENKURQ8TC29 256 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 C17orf50Q8WW18 174 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 LRRC39Q96DD0 335 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 DOK1Q99704 481 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 HAUS4Q9H6D7 363 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 LRRC42Q9Y546 428 aa6.47□□□□□ -1.37
CASC4-208ENST00000559151 IGHV2OR16-5A0A0B4J2B6 119 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 SLC35G6P0C7Q6 338 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 HSPD1P10809 573 aaKnown RBP6.46□□□□□ -1.38
CASC4-208ENST00000559151 IFFO1Q0D2I5 559 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 COX19Q49B96 90 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 EPGNQ6UW88 154 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 LINC00469Q8N7U9 141 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 Q96MT0 163 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 ZNF835Q9Y2P0 537 aa6.46□□□□□ -1.38
CASC4-208ENST00000559151 SYNJ1O43426 1573 aa6.45□□□□□ -1.38
CASC4-208ENST00000559151 IGHV3-49A0A0A0MS15 119 aa6.45□□□□□ -1.38
CASC4-208ENST00000559151 CENPVL3A0A0U1RRI6 287 aa6.45□□□□□ -1.38
CASC4-208ENST00000559151 TMEM150BA6NC51 233 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms